RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 EMDP50402 254 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 RNF4P78317 190 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 MAPKAPK3Q16644 382 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 GPR155Q7Z3F1 870 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 CCDC197Q8NCU1 140 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 OR4A15Q8NGL6 344 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 C16orf52Q8NHV5 167 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 BRIX1Q8TDN6 353 aaKnown RBP19.58■□□□□ 0.72
CACNB3-210ENST00000548874 FAM120BQ96EK7 910 aaKnown RBP19.58■□□□□ 0.72
CACNB3-210ENST00000548874 INPP5KQ9BT40 448 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 RMND5AQ9H871 391 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 DDX18Q9NVP1 670 aaKnown RBP19.58■□□□□ 0.72
CACNB3-210ENST00000548874 PCDHGB4Q9UN71 923 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 CFAP47Q6ZTR5 3102 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 TMEM200CA6NKL6 621 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 EMC8O43402 210 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 CPSF4O95639 269 aaKnown RBP19.57■□□□□ 0.72
CACNB3-210ENST00000548874 ABCB1P08183 1280 aaPredicted RBP19.57■□□□□ 0.72
CACNB3-210ENST00000548874 SNRPB2P08579 225 aaKnown RBP19.57■□□□□ 0.72
CACNB3-210ENST00000548874 CCL11P51671 97 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 MYBPC3Q14896 1274 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 EBPQ15125 230 aaKnown RBP19.57■□□□□ 0.72
CACNB3-210ENST00000548874 SLC2A7Q6PXP3 512 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 NUBPLQ8TB37 319 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 SFXN5Q8TD22 340 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 GTF2H4Q92759 462 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 ITCHQ96J02 903 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 PANX1Q96RD7 426 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 DEFB126Q9BYW3 111 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 C3orf14Q9HBI5 128 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 BCAP29Q9UHQ4 241 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 CFL2Q9Y281 166 aa19.57■□□□□ 0.72
CACNB3-210ENST00000548874 DOCK10Q96BY6 2186 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 COQ9O75208 318 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 DCTN3O75935 186 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 PTPN6P29350 595 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 SOX11P35716 441 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 CDKN2CP42773 168 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 TRPC1P48995 793 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 CCT3P49368 545 aaKnown RBP19.56■□□□□ 0.72
CACNB3-210ENST00000548874 MAPRE2Q15555 327 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 COL28A1Q2UY09 1125 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 C19orf48Q6RUI8 117 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 TREML1Q86YW5 311 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 LGI4Q8N135 537 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 ZNF441Q8N8Z8 693 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 EXTL1Q92935 676 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 MOAP1Q96BY2 351 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 GIMAP5Q96F15 307 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 MAGED4Q96JG8 741 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 NPAS2Q99743 824 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 SLC25A23Q9BV35 468 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 WWTR1Q9GZV5 400 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 PRODH2Q9UF12 536 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 DTX4Q9Y2E6 619 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 HEMK1Q9Y5R4 338 aaPredicted RBP19.56■□□□□ 0.72
CACNB3-210ENST00000548874 SNX8Q9Y5X2 465 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 PKD1L2Q7Z442 2459 aa19.56■□□□□ 0.72
CACNB3-210ENST00000548874 USP24Q9UPU5 2620 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 A6NL46 340 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 CAPN14A8MX76 684 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 RFXANKO14593 260 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 ZCCHC18P0CG32 403 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 HOXB9P17482 250 aaPredicted RBP19.55■□□□□ 0.72
CACNB3-210ENST00000548874 PRR5P85299 388 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 GAB1Q13480 694 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 PAGE3Q5JUK9 113 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 IRAK1BP1Q5VVH5 260 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 FAM91A1Q658Y4 838 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 SLC29A4Q7RTT9 530 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 RETREG3Q86VR2 466 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 SLC5A8Q8N695 610 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 SIRT6Q8N6T7 355 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 NUP43Q8NFH3 380 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 FDCSPQ8NFU4 85 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 OR56A1Q8NGH5 318 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 OR5L2Q8NGL0 311 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 HOXB13Q92826 284 aaPredicted RBP19.55■□□□□ 0.72
CACNB3-210ENST00000548874 ADIPOR1Q96A54 375 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 VSTM2LQ96N03 204 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 MS4A4EQ96PG1 132 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 LRRC37BQ96QE4 947 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 PHF12Q96QT6 1004 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 ZNF552Q9H707 407 aaPredicted RBP19.55■□□□□ 0.72
CACNB3-210ENST00000548874 SLC6A13Q9NSD5 602 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 ZCCHC3Q9NUD5 404 aaKnown RBP19.55■□□□□ 0.72
CACNB3-210ENST00000548874 GPR83Q9NYM4 423 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 LEF1Q9UJU2 399 aaPredicted RBP19.55■□□□□ 0.72
CACNB3-210ENST00000548874 NDUFAF1Q9Y375 327 aa19.55■□□□□ 0.72
CACNB3-210ENST00000548874 A8MUI8 341 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 FBP2O00757 339 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 NME6O75414 186 aaPredicted RBP19.54■□□□□ 0.72
CACNB3-210ENST00000548874 UQCRC2P22695 453 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 SOAT1P35610 550 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 MLF1P58340 268 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 SPDYE7PQ495Y7 208 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 CRB2Q5IJ48 1285 aa19.54■□□□□ 0.72
CACNB3-210ENST00000548874 EXOSC6Q5RKV6 272 aaKnown RBP19.54■□□□□ 0.72
CACNB3-210ENST00000548874 LRIF1Q5T3J3 769 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms