RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 GOLGA6L10A6NI86 522 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 LRRC3CA6NJW4 275 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 A8MT66 165 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 GOLGA8RI6L899 631 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 MANBAO00462 879 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 DLX3O60479 287 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 HCN1O60741 890 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 WDR1O75083 606 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 SUPT7LO94864 414 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 OR4F21O95013 312 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 ESRRBO95718 433 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 RPS17P08708 135 aaKnown RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 SBK3P0C264 359 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 CPMP14384 443 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 KRT15P19012 456 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 CSNK2A2P19784 350 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 POU3F2P20265 443 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 TAC1P20366 129 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 GDF1P27539 372 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 ECHS1P30084 290 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 ADH7P40394 386 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 ZFP36L2P47974 494 aaKnown RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 MASP1P48740 699 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 NRG3P56975 720 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 CLCQ05315 142 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 GALNT1Q10472 559 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 FUT7Q11130 342 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 DUSP8Q13202 625 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 EXOSC7Q15024 291 aaKnown RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 NNATQ16517 81 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 UNC50Q53HI1 259 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 TCHHL1Q5QJ38 904 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 C10orf62Q5T681 223 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 C1orf185Q5T7R7 199 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 BICRALQ6AI39 1079 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 SLC48A1Q6P1K1 146 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 FAM111BQ6SJ93 734 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 C1orf229Q6ZS94 237 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 COMMD6Q7Z4G1 85 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 DND1Q8IYX4 353 aaKnown RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 LRRC25Q8N386 305 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 C1orf52Q8N6N3 182 aaKnown RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 CDYL2Q8N8U2 506 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 ZNF441Q8N8Z8 693 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 ADCY4Q8NFM4 1077 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 OR7G1Q8NGA0 311 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 NEIL3Q8TAT5 605 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 METTL6Q8TCB7 284 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 SPPL2AQ8TCT8 520 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 ZNF483Q8TF39 744 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 ADIPOR1Q96A54 375 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 TM4SF18Q96CE8 201 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 KLHL29Q96CT2 875 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 C14orf79Q96F83 325 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 ZNF703Q9H7S9 590 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 MCCC2Q9HCC0 563 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 ACKR4Q9NPB9 350 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 PFDN4Q9NQP4 134 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 SPRR3Q9UBC9 169 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 VPS29Q9UBQ0 182 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 GDF2Q9UK05 429 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 CES1P1Q9UKY3 287 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 CNOT11Q9UKZ1 510 aaKnown RBP6.15□□□□□ -1.42
SCAF11-211ENST00000547950 PCDHA9Q9Y5H5 950 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 FAM215AQ9Y5M1 114 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 ZNF780BQ9Y6R6 833 aa6.15□□□□□ -1.42
SCAF11-211ENST00000547950 DIDO1Q9BTC0 2240 aaKnown RBP6.15□□□□□ -1.43
SCAF11-211ENST00000547950 CPAMD8Q8IZJ3 1885 aa6.15□□□□□ -1.43
SCAF11-211ENST00000547950 ABCA12Q86UK0 2595 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 MYO7BQ6PIF6 2116 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 CACNA1DQ01668 2161 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 A0A0G2JNJ9 132 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 C1orf226A1L170 272 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 ANKRD33BA6NCL7 494 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 FOXO6A8MYZ6 492 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 GNB5O14775 395 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 TRIM3O75382 744 aaPredicted RBP6.14□□□□□ -1.43
SCAF11-211ENST00000547950 ULK1O75385 1050 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 SNX4O95219 450 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 KRT6AP02538 564 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 KRT6BP04259 564 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 ABCB1P08183 1280 aaPredicted RBP6.14□□□□□ -1.43
SCAF11-211ENST00000547950 HOXD4P09016 255 aaPredicted RBP6.14□□□□□ -1.43
SCAF11-211ENST00000547950 FAM153BP0C7A2 387 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 RHOXF2BP0C7M4 288 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 GABRA1P14867 456 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 CHN1P15882 459 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 CAPN3P20807 821 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 IMPDH1P20839 514 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 ENDOUP21128 410 aaKnown RBP6.14□□□□□ -1.43
SCAF11-211ENST00000547950 S1PR1P21453 382 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 GPX3P22352 226 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 ABCD3P28288 659 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 GCAP28676 217 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 KRT6CP48668 564 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 RPP38P78345 283 aaKnown RBP6.14□□□□□ -1.43
SCAF11-211ENST00000547950 BTKQ06187 659 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 TFF3Q07654 80 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 MGAT2Q10469 447 aa6.14□□□□□ -1.43
SCAF11-211ENST00000547950 MAP4K2Q12851 820 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms