RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 AIG1Q9NVV5 245 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 LRFN1Q9P244 771 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 PCDHGA10Q9Y5H3 936 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 CSAG2Q9Y5P2 127 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 GPR45Q9Y5Y3 372 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 SPTA1P02549 2419 aa13.4□□□□□ -0.26
DDX54-203ENST00000546869 GOLGA8QA0A0J9YX86 632 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 GOLGA8OA6NCC3 632 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 GOLGA8NF8WBI6 632 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 WWP2O00308 870 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 PSMG1O95456 288 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 NADKO95544 446 aaPredicted RBP13.39□□□□□ -0.27
DDX54-203ENST00000546869 ALDOCP09972 364 aaKnown RBP13.39□□□□□ -0.27
DDX54-203ENST00000546869 LAMP1P11279 417 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 IDO1P14902 403 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 NAGAP17050 411 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 DRD5P21918 477 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 GPX3P22352 226 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 PPICP45877 212 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 MRPL19P49406 292 aaKnown RBP13.39□□□□□ -0.27
DDX54-203ENST00000546869 CLNS1AP54105 237 aaKnown RBP13.39□□□□□ -0.27
DDX54-203ENST00000546869 MANFP55145 182 aaKnown RBP13.39□□□□□ -0.27
DDX54-203ENST00000546869 MRPS35P82673 323 aaKnown RBP13.39□□□□□ -0.27
DDX54-203ENST00000546869 GSTA3Q16772 222 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 LSM12Q3MHD2 195 aaKnown RBP13.39□□□□□ -0.27
DDX54-203ENST00000546869 HLA-DQA1Q5Y7H0 255 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 SPINK14Q6IE38 97 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 ZNF227Q86WZ6 799 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 TAGAPQ8N103 731 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 KRTCAP2Q8N6L1 136 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 OR7G2Q8NG99 324 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 OR7A2PQ8NGA2 310 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 OR52R1Q8NGF1 315 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 DOK4Q8TEW6 326 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 KAT2AQ92830 837 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 HSPBAP1Q96EW2 488 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 SGCZQ96LD1 299 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 SIGLEC12Q96PQ1 595 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 BARD1Q99728 777 aaKnown RBP13.39□□□□□ -0.27
DDX54-203ENST00000546869 CCDC28BQ9BUN5 200 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 DPY30Q9C005 99 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 TAS2R9Q9NYW1 312 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 CPAMD8Q8IZJ3 1885 aa13.39□□□□□ -0.27
DDX54-203ENST00000546869 KALRNO60229 2985 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 TNRC6AQ8NDV7 1962 aaKnown RBP13.38□□□□□ -0.27
DDX54-203ENST00000546869 CFAP46Q8IYW2 2715 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 A0A1W2PRB8 838 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 TTC36A6NLP5 189 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 TCP11X1B4DZS4 312 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 UPK1AO00322 258 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 TO15178 435 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 ACOX3O15254 700 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 COQ9O75208 318 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 SP1P08047 785 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 FBXO45P0C2W1 286 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 CD46P15529 392 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 IDH3AP50213 366 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 OC90Q02509 493 aaPredicted RBP13.38□□□□□ -0.27
DDX54-203ENST00000546869 EXOSC7Q15024 291 aaKnown RBP13.38□□□□□ -0.27
DDX54-203ENST00000546869 ZNF791Q3KP31 576 aaPredicted RBP13.38□□□□□ -0.27
DDX54-203ENST00000546869 ZNF766Q5HY98 468 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 SLC25A25Q6KCM7 469 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 ANKRD26P1Q6NSI1 321 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 LYPD8Q6UX82 237 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 FAM47EQ6ZV65 393 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 ACAD11Q709F0 780 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 ZNF551Q7Z340 670 aaPredicted RBP13.38□□□□□ -0.27
DDX54-203ENST00000546869 GOLM1Q8NBJ4 401 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 TMEM178AQ8NBL3 297 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 GLB1L3Q8NCI6 653 aaPredicted RBP13.38□□□□□ -0.27
DDX54-203ENST00000546869 ASB15Q8WXK1 588 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 OR5P2Q8WZ92 322 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 CIDECQ96AQ7 238 aaPredicted RBP13.38□□□□□ -0.27
DDX54-203ENST00000546869 VSTM2LQ96N03 204 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 OR52B2Q96RD2 323 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 DUSP26Q9BV47 211 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 CLMPQ9H6B4 373 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 LIN28AQ9H9Z2 209 aaKnown RBP13.38□□□□□ -0.27
DDX54-203ENST00000546869 BCAP29Q9UHQ4 241 aa13.38□□□□□ -0.27
DDX54-203ENST00000546869 GPR55Q9Y2T6 319 aaPredicted RBP13.38□□□□□ -0.27
DDX54-203ENST00000546869 TTLL8A6PVC2 850 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 A8MVJ9 347 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 CAPN14A8MX76 684 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 UBDO15205 165 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 ZNF354AO60765 605 aaPredicted RBP13.37□□□□□ -0.27
DDX54-203ENST00000546869 DIAPH2O60879 1101 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 SCN2BO60939 215 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 SLC25A12O75746 678 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 OR6B1O95007 311 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 MDH1P40925 334 aaKnown RBP13.37□□□□□ -0.27
DDX54-203ENST00000546869 SOX3P41225 446 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 MC3RP41968 323 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 AQP5P55064 265 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 NRG3P56975 720 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 PDCD4Q53EL6 469 aaKnown RBP13.37□□□□□ -0.27
DDX54-203ENST00000546869 ANXA8L1Q5VT79 327 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 NXNQ6DKJ4 435 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 TMEM107Q6UX40 140 aa13.37□□□□□ -0.27
DDX54-203ENST00000546869 C16orf47Q6ZP98 133 aaPredicted RBP13.37□□□□□ -0.27
DDX54-203ENST00000546869 ZNF605Q86T29 641 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms