RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ABCG4Q9H172 646 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 OR10A4Q9H209 315 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 ZDHHC4Q9NPG8 344 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.21□□□□□ -0.45
PTCH1-212ENST00000546744 LAMP5Q9UJQ1 280 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 UTS2RQ9UKP6 389 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 TRBV2A0A0J9YWF9 115 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 UNC119BA6NIH7 251 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 SORBS2O94875 1100 aaKnown RBP12.21□□□□□ -0.45
PTCH1-212ENST00000546744 FARS2O95363 451 aaKnown RBP12.21□□□□□ -0.45
PTCH1-212ENST00000546744 DRD2P14416 443 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 IL1RNP18510 177 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 CHRNA6Q15825 494 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 FRMPD2BQ6IN97 320 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 ZNF366Q8N895 744 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 EMID1Q96A84 441 aaPredicted RBP12.21□□□□□ -0.45
PTCH1-212ENST00000546744 SLC41A3Q96GZ6 507 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 HRASLS5Q96KN8 279 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 GPSM3Q9Y4H4 160 aa12.21□□□□□ -0.45
PTCH1-212ENST00000546744 DDX60LQ5H9U9 1706 aaKnown RBP12.21□□□□□ -0.45
PTCH1-212ENST00000546744 TBC1D3BA6NDS4 549 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 TFPIP10646 304 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 ALAS2P22557 587 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 GABRA5P31644 462 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 OR1E2P47887 323 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 AGTR2P50052 363 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 SLC10A2Q12908 348 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-212ENST00000546744 SLC14A2Q15849 920 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 FOXB2Q5VYV0 432 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 CHRDL2Q6WN34 429 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 RPS27LQ71UM5 84 aaKnown RBP12.21□□□□□ -0.46
PTCH1-212ENST00000546744 CLEC14AQ86T13 490 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 DCAF4L2Q8NA75 395 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 ANKK1Q8NFD2 765 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 OR6K2Q8NGY2 324 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 SORCS1Q8WY21 1168 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 DNTTIP1Q9H147 329 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 OR2S2Q9NQN1 319 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 NME7Q9Y5B8 376 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 PCDHGA2Q9Y5H1 932 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 PCDHA9Q9Y5H5 950 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 CASC3O15234 703 aaKnown RBP12.21□□□□□ -0.46
PTCH1-212ENST00000546744 EOMESO95936 686 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 IFNA5P01569 189 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 CSN2P05814 226 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 FHP07954 510 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 ABRAXAS2Q15018 415 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 ALG10Q5BKT4 473 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 CES4AQ5XG92 561 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 TRIM46Q7Z4K8 759 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 PHYHIPQ92561 330 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 FUBP1Q96AE4 644 aaKnown RBP12.21□□□□□ -0.46
PTCH1-212ENST00000546744 CNN2Q99439 309 aaKnown RBP12.21□□□□□ -0.46
PTCH1-212ENST00000546744 SLC28A3Q9HAS3 691 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 RRAGCQ9HB90 399 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 HHATLQ9HCP6 504 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 ASF1BQ9NVP2 202 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 SARDHQ9UL12 918 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 NUMBLQ9Y6R0 609 aa12.21□□□□□ -0.46
PTCH1-212ENST00000546744 SCG5P05408 212 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF157P51786 506 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-212ENST00000546744 CLCNKBP51801 687 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 HERV-K104P61576 105 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 RPS13P62277 151 aaKnown RBP12.2□□□□□ -0.46
PTCH1-212ENST00000546744 RD3Q7Z3Z2 195 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 TMPRSS12Q86WS5 348 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 OR2AP1Q8NGE2 309 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 SCGB1C1Q8TD33 95 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 MZB1Q8WU39 189 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 THAP4Q8WY91 577 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 ARNTL2Q8WYA1 636 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 NTN4Q9HB63 628 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 ADAP2Q9NPF8 381 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 NRXN2Q9P2S2 1712 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 MANSC4A6NHS7 340 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-212ENST00000546744 CTDSP2O14595 271 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 RPL10P27635 214 aaKnown RBP12.2□□□□□ -0.46
PTCH1-212ENST00000546744 CAMLGP49069 296 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 TLE2Q04725 743 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 ENPP2Q13822 863 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 C14orf28Q4W4Y0 310 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 TREML2Q5T2D2 321 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 RASGEF1AQ8N9B8 481 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF566Q969W8 418 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 LURAP1Q96LR2 239 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 C10orf90Q96M02 699 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 PRRT1Q99946 306 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 SGIP1Q9BQI5 828 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 DPEP2Q9H4A9 486 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 BRF2Q9HAW0 419 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 APMAPQ9HDC9 416 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 MRPS30Q9NP92 439 aaKnown RBP12.2□□□□□ -0.46
PTCH1-212ENST00000546744 MED17Q9NVC6 651 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 CD8B2A6NJW9 211 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 ATP6V1G2-DDX39BF2Z307 99 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 MUSKO15146 869 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 B4GAT1O43505 415 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 GPRIN2O60269 458 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 PDYNP01213 254 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 AKAIN1P0CW23 69 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms