RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 EMP2P54851 167 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 AQP5P55064 265 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 PLIN5Q00G26 463 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 ID2Q02363 134 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 FOLH1Q04609 750 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 EMX2Q04743 252 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 ATP1A4Q13733 1029 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 HEPACAMQ14CZ8 416 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 NSDHLQ15738 373 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 SMU1Q2TAY7 513 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 KRTAP19-4Q3LI73 84 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 NXNQ6DKJ4 435 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 FAAH2Q6GMR7 532 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 SLC48A1Q6P1K1 146 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 INO80CQ6PI98 192 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-211ENST00000546304 LARP4Q71RC2 724 aaKnown RBP eCLIP5.92□□□□□ -1.46
PRKDC-211ENST00000546304 TMEM132CQ8N3T6 1108 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 LIX1Q8N485 282 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.92□□□□□ -1.46
PRKDC-211ENST00000546304 ACTRT2Q8TDY3 377 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 C16orf78Q8WTQ4 265 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 METTL21AQ8WXB1 218 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 STON2Q8WXE9 905 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 TANKQ92844 425 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 NACC2Q96BF6 587 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 C8orf44Q96CB5 159 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 TM4SF18Q96CE8 201 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 KLHL29Q96CT2 875 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 THOC1Q96FV9 657 aaKnown RBP5.92□□□□□ -1.46
PRKDC-211ENST00000546304 ZNF764Q96H86 408 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-211ENST00000546304 VPS50Q96JG6 964 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 PTCHD1Q96NR3 888 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 IP6K3Q96PC2 410 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 ZNF317Q96PQ6 595 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-211ENST00000546304 OR52B2Q96RD2 323 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 EBF4Q9BQW3 602 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 MESP1Q9BRJ9 268 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 CDADC1Q9BWV3 514 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 TRIM55Q9BYV6 548 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 RPF2Q9H7B2 306 aaKnown RBP5.92□□□□□ -1.46
PRKDC-211ENST00000546304 CPNE5Q9HCH3 593 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 TCF7L2Q9NQB0 619 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 MIEF1Q9NQG6 463 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 AIG1Q9NVV5 245 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 EHD3Q9NZN3 535 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 C5AR2Q9P296 337 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 FBXL4Q9UKA2 621 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 ENTPD4Q9Y227 616 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 EIF3LQ9Y262 564 aaKnown RBP5.92□□□□□ -1.46
PRKDC-211ENST00000546304 MAN2B2Q9Y2E5 1009 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 ZNF451Q9Y4E5 1061 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 PCDHA9Q9Y5H5 950 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 CLDN16Q9Y5I7 305 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 CFAP46Q8IYW2 2715 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 LOC102723996A0A087X1L8 192 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 IGHV3-20A0A0C4DH32 117 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 A0A0G2JND7 137 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 SAGE2PA6NJ88 616 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 SRRM3A6NNA2 597 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 E9PBE3 544 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 ETV2O00321 342 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 PEX12O00623 359 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 SCAMP2O15127 329 aaKnown RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 NKX2-8O15522 239 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 OR10H2O60403 315 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 KLHL41O60662 606 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 CTNSO60931 367 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 SEMA7AO75326 666 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 SEC24DO94855 1032 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 LRATO95237 230 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 G6PDP11413 515 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 PRPS2P11908 318 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 COX7A2P14406 83 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 IDO1P14902 403 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 DIO3P55073 304 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 GNGT1P63211 74 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 CXADRP78310 365 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 BTG2P78543 158 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 IGLV3-21P80748 117 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 STX4Q12846 297 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 PDE7AQ13946 482 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 SERTAD2Q14140 314 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 SSPNQ14714 243 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 PCOLCEQ15113 449 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 TERF2Q15554 542 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 ELAVL1Q15717 326 aaKnown RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 ST3GAL2Q16842 350 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 SFT2D3Q587I9 215 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 IL23RQ5VWK5 629 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 TMEM198Q66K66 360 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 CPZQ66K79 652 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 FAM71E1Q6IPT2 247 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 CGB2Q6NT52 195 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 PAPD4Q6PIY7 484 aaKnown RBP5.91□□□□□ -1.46
PRKDC-211ENST00000546304 TMEM205Q6UW68 189 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 EPGNQ6UW88 154 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 KIRREL2Q6UWL6 708 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 ANKRD37Q7Z713 158 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 TICAM1Q8IUC6 712 aa5.91□□□□□ -1.46
PRKDC-211ENST00000546304 FAM9CQ8IZT9 166 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms