RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 ANKRD19PQ9H560 264 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 B3GAT2Q9NPZ5 323 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 MARCH5Q9NX47 278 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 LHX3Q9UBR4 397 aa7.48□□□□□ -1.21
UBR1-202ENST00000546274 MRTO4Q9UKD2 239 aaKnown RBP7.48□□□□□ -1.21
UBR1-202ENST00000546274 C17orf113A0A1B0GUU1 675 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 ELOVL7A1L3X0 281 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 OR6C75A6NL08 312 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 SLC38A8A6NNN8 435 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CCNB2O95067 398 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CCNDBP1O95273 360 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 GUCA1CO95843 209 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 DHFRP00374 187 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 C1QCP02747 245 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 EDN3P14138 238 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 RNF4P78317 190 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CACNG1Q06432 222 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 SLC3A1Q07837 685 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 NPRL3Q12980 569 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 DOC2BQ14184 412 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CHRNA6Q15825 494 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 SSX1Q16384 188 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 MAPKAPK3Q16644 382 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 NHLRC3Q5JS37 347 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 PRAMEF13Q5VWM6 474 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 MILR1Q7Z6M3 343 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 ZNF605Q86T29 641 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 UCN3Q969E3 161 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 RAB7BQ96AH8 199 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 PPP3R2Q96LZ3 170 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 SLC38A2Q96QD8 506 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 ADGRE3Q9BY15 652 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CIPCQ9C0C6 399 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.47□□□□□ -1.21
UBR1-202ENST00000546274 ASIC5Q9NY37 505 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 SLCO1C1Q9NYB5 712 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 GHRLQ9UBU3 117 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 EXO1Q9UQ84 846 aaKnown RBP7.47□□□□□ -1.21
UBR1-202ENST00000546274 SAMHD1Q9Y3Z3 626 aaKnown RBP7.47□□□□□ -1.21
UBR1-202ENST00000546274 OARD1Q9Y530 152 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 OR2W5A6NFC9 320 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 ARGFXA6NJG6 315 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 ANXA2P2A6NMY6 339 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 C2orf74A8MZ97 194 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 AIPO00170 330 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 SSNA1O43805 119 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CLDN11O75508 207 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 IFNA4P05014 189 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 EPORP19235 508 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 VIPR1P32241 457 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 PTGFRP43088 359 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CAMK2DQ13557 499 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 ACER2Q5QJU3 275 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 ZCCHC12Q6PEW1 402 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 NUDT18Q6ZVK8 323 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 ATCAYQ86WG3 371 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 RGL4Q8IZJ4 473 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 OR9Q1Q8NGQ5 310 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 RHOVQ96L33 236 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 VRK1Q99986 396 aaPredicted RBP7.47□□□□□ -1.21
UBR1-202ENST00000546274 H2AFJQ9BTM1 129 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 TMEM106CQ9BVX2 250 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 ARHGAP39Q9C0H5 1083 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 EMC7Q9NPA0 242 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CDH10Q9Y6N8 788 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 A0A1B0GWJ7 208 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 FAM220BPB1ANY3 271 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 TERTO14746 1132 aaKnown RBP7.47□□□□□ -1.21
UBR1-202ENST00000546274 SCAMP2O15127 329 aaKnown RBP7.47□□□□□ -1.21
UBR1-202ENST00000546274 CLN5O75503 358 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CREG1O75629 220 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 SCELO95171 688 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 IL6P05231 212 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 RHOCP08134 193 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 FGF2P09038 288 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CKBP12277 381 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 PRF1P14222 555 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 PRKCZQ05513 592 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 SLC14A1Q13336 389 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 PUM1Q14671 1186 aaKnown RBP eCLIP7.47□□□□□ -1.21
UBR1-202ENST00000546274 GRIN2CQ14957 1233 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 OR2B11Q5JQS5 317 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 LRIF1Q5T3J3 769 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CNIH2Q6PI25 160 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 AKR7LQ8NHP1 331 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 TRMT10AQ8TBZ6 339 aaKnown RBP7.47□□□□□ -1.21
UBR1-202ENST00000546274 SNX33Q8WV41 574 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 MRPS24Q96EL2 167 aaKnown RBP7.47□□□□□ -1.21
UBR1-202ENST00000546274 ELMOD3Q96FG2 381 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 MS4A3Q96HJ5 214 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 WDFY2Q96P53 400 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CPPED1Q9BRF8 314 aaPredicted RBP7.47□□□□□ -1.21
UBR1-202ENST00000546274 TMEM43Q9BTV4 400 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 JAM3Q9BX67 310 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 MAGIXQ9H6Y5 334 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 CWH43Q9H720 699 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 BTNL2Q9UIR0 455 aa7.47□□□□□ -1.21
UBR1-202ENST00000546274 TMEM200CA6NKL6 621 aa7.46□□□□□ -1.21
UBR1-202ENST00000546274 SEPT4O43236 478 aa7.46□□□□□ -1.21
UBR1-202ENST00000546274 COCHO43405 550 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms