RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ZER1Q7Z7L7 766 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 IQCHQ86VS3 1027 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 TMEM173Q86WV6 379 aaPredicted RBP13.43□□□□□ -0.26
SRP54-202ENST00000546080 OR4K5Q8NGD3 323 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 RAB8BQ92930 207 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 SCAMP4Q969E2 229 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 NEURL3Q96EH8 262 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 FOPNLQ96NB1 174 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 ZNF607Q96SK3 696 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 WFDC6Q9BQY6 131 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 EXTL2Q9UBQ6 330 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 A4GNTQ9UNA3 340 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 CACNB4O00305 520 aaPredicted RBP13.42□□□□□ -0.26
SRP54-202ENST00000546080 TSPAN6O43657 245 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 DHFRP00374 187 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 HLA-DPB1P04440 258 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 LIMS3P0CW19 117 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 LIMS4P0CW20 117 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 OR12D1P0DN82 309 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 CKBP12277 381 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 STOMP27105 288 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 TBPL1P62380 186 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 EFNB1P98172 346 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 TAGLNQ01995 201 aaKnown RBP13.42□□□□□ -0.26
SRP54-202ENST00000546080 C9orf131Q5VYM1 1079 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 LHFPL3Q86UP9 236 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 LILRA3Q8N6C8 439 aaPredicted RBP13.42□□□□□ -0.26
SRP54-202ENST00000546080 FGF11Q92914 225 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 CHFRQ96EP1 664 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 EFCAB11Q9BUY7 163 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 FNDC11Q9BVV2 318 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 SPNS1Q9H2V7 528 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 ICKQ9UPZ9 632 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 GPR52Q9Y2T5 361 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 PCM1Q15154 2024 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 A0A1W2PRQ8 180 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 SHISA3A0PJX4 238 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 M0R3H8 397 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 LALBAP00709 142 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 RAF1P04049 648 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 TPOP07202 933 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 C1GALT1C1LP0DN25 315 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 MEF2AQ02078 507 aaPredicted RBP13.42□□□□□ -0.26
SRP54-202ENST00000546080 CNTN1Q12860 1018 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 TAF1CQ15572 869 aaPredicted RBP13.42□□□□□ -0.26
SRP54-202ENST00000546080 SPDYE7PQ495Y7 208 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 TMEM107Q6UX40 140 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 ASB18Q6ZVZ8 466 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 IKBIPQ70UQ0 350 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 ARIH2OSQ8N7S6 290 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 TEX47Q8TBZ9 253 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 RAET1EQ8TD07 263 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 VOPP1Q96AW1 172 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 TMEM169Q96HH4 297 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 ACAT2Q9BWD1 397 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 RNF32Q9H0A6 362 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 EMC7Q9NPA0 242 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 CLEC4EQ9ULY5 219 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 SH2B3Q9UQQ2 575 aa13.42□□□□□ -0.26
SRP54-202ENST00000546080 CD8B2A6NJW9 211 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 GTPBP1O00178 669 aaKnown RBP13.41□□□□□ -0.26
SRP54-202ENST00000546080 NPC1O15118 1278 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 AKAP8O43823 692 aaKnown RBP13.41□□□□□ -0.26
SRP54-202ENST00000546080 SLC28A2O43868 658 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 ADAMTS4O75173 837 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 CD8BP10966 210 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 ELK1P19419 428 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 CELP19835 753 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 HLA-FP30511 346 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 CD70P32970 193 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 PTGS2P35354 604 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 SLC1A3P43003 542 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 CTSOP43234 321 aaPredicted RBP13.41□□□□□ -0.26
SRP54-202ENST00000546080 MANFP55145 182 aaKnown RBP13.41□□□□□ -0.26
SRP54-202ENST00000546080 UAP1L1Q3KQV9 507 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 LUZP2Q86TE4 346 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 GRAMD2AQ8IUY3 354 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 LINC00471Q8N535 108 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 SMG7Q92540 1137 aaKnown RBP13.41□□□□□ -0.26
SRP54-202ENST00000546080 RFT1Q96AA3 541 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 SLC22A12Q96S37 553 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 C17orf62Q9BQA9 187 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 SORBS1Q9BX66 1292 aaKnown RBP13.41□□□□□ -0.26
SRP54-202ENST00000546080 ZFP64Q9NPA5 681 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 POLHQ9Y253 713 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 C2orf92A0A1B0GVN3 265 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 CHST10O43529 356 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 MMP20O60882 483 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 PAHP00439 452 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 ANXA3P12429 323 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 PBLDP30039 288 aaPredicted RBP13.41□□□□□ -0.26
SRP54-202ENST00000546080 POU6F2P78424 691 aaPredicted RBP13.41□□□□□ -0.26
SRP54-202ENST00000546080 INSL4Q14641 139 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 COL28A1Q2UY09 1125 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 KLHL12Q53G59 568 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 PLA1AQ53H76 456 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 SLC8B1Q6J4K2 584 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 C22orf39Q6P5X5 142 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 ADAMTS19Q8TE59 1207 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 ZNF480Q8WV37 535 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms