RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 GIMAP5Q96F15 307 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 VMP1Q96GC9 406 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 CCDC115Q96NT0 180 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 ATP13A2Q9NQ11 1180 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 FAM120CQ9NX05 1096 aaKnown RBP15.12■□□□□ 0.01
LIMS2-217ENST00000545738 ARL2BPQ9Y2Y0 163 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 SYNDIG1LA6NDD5 238 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 K7EM74 188 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 FBP2O00757 339 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 GSNP06396 782 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 HOXB9P17482 250 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-217ENST00000545738 ITGA3P26006 1051 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 SOX8P57073 446 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 EBPQ15125 230 aaKnown RBP15.12■□□□□ 0.01
LIMS2-217ENST00000545738 DNAJC14Q6Y2X3 702 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-217ENST00000545738 KBTBD2Q8IY47 623 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 BCAS4Q8TDM0 211 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 GTF2H4Q92759 462 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 ZBTB18Q99592 522 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 ZNF552Q9H707 407 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-217ENST00000545738 MAPRE3Q9UPY8 281 aa15.12■□□□□ 0.01
LIMS2-217ENST00000545738 IGSF10Q6WRI0 2623 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 TLN1Q9Y490 2541 aaKnown RBP15.11■□□□□ 0.01
LIMS2-217ENST00000545738 CEACAM4O75871 244 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 CPSF4O95639 269 aaKnown RBP15.11■□□□□ 0.01
LIMS2-217ENST00000545738 PDGFAP04085 211 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 CLCN2P51788 898 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 RNF4P78317 190 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 TCTN3Q6NUS6 607 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 H3F3CQ6NXT2 135 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 MSRB3Q8IXL7 192 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 POU5F2Q8N7G0 328 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 OR4A15Q8NGL6 344 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 APOBEC4Q8WW27 367 aaKnown RBP15.11■□□□□ 0.01
LIMS2-217ENST00000545738 LMF1Q96S06 567 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 SERHL2Q9H4I8 314 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 TAS2R9Q9NYW1 312 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 NTMQ9P121 344 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 BTNL2Q9UIR0 455 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 C19orf53Q9UNZ5 99 aaPredicted RBP15.11■□□□□ 0.01
LIMS2-217ENST00000545738 SNX8Q9Y5X2 465 aa15.11■□□□□ 0.01
LIMS2-217ENST00000545738 A0A087WV62 115 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 CCDC154A6NI56 674 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 CAPN14A8MX76 684 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 GPC1P35052 558 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 SOX11P35716 441 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 RRADP55042 308 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 KCNK10P57789 538 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 NNATQ16517 81 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 GKAP1Q5VSY0 366 aaPredicted RBP15.1■□□□□ 0.01
LIMS2-217ENST00000545738 BORAQ6PGQ7 559 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 RNF111Q6ZNA4 994 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 ANKS4BQ8N8V4 417 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 ZNF441Q8N8Z8 693 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 GOT1L1Q8NHS2 421 aaPredicted RBP15.1■□□□□ 0.01
LIMS2-217ENST00000545738 ZFP28Q8NHY6 868 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 TTC9Q92623 222 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 ADIPOR1Q96A54 375 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 OTUB1Q96FW1 271 aaPredicted RBP15.1■□□□□ 0.01
LIMS2-217ENST00000545738 VSTM2LQ96N03 204 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 ITPAQ9BY32 194 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 LHPPQ9H008 270 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 DDX18Q9NVP1 670 aaKnown RBP15.1■□□□□ 0.01
LIMS2-217ENST00000545738 GPR83Q9NYM4 423 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 PTGFRNQ9P2B2 879 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 BCAP29Q9UHQ4 241 aa15.1■□□□□ 0.01
LIMS2-217ENST00000545738 PRRC2CQ9Y520 2896 aaKnown RBP15.09■□□□□ 0.01
LIMS2-217ENST00000545738 LOC100653049A0A140TA62 436 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 A0A1W2PP18 115 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 A8MUI8 341 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 NDUFAB1O14561 156 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 CFLARO15519 480 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 KRT34O76011 436 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 CASP9P55211 416 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 CORO7P57737 925 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 IRX1P78414 480 aaPredicted RBP15.09■□□□□ 0.01
LIMS2-217ENST00000545738 ANXA8L1Q5VT79 327 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 PCSK4Q6UW60 755 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 NPSR1Q6W5P4 371 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 HSDL2Q6YN16 418 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 SNX32Q86XE0 403 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 FITM2Q8N6M3 262 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 AURKBQ96GD4 344 aaPredicted RBP15.09■□□□□ 0.01
LIMS2-217ENST00000545738 C16orf58Q96GQ5 468 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 WWTR1Q9GZV5 400 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 PAIP1Q9H074 479 aaKnown RBP15.09■□□□□ 0.01
LIMS2-217ENST00000545738 NEUROD4Q9HD90 331 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 GPATCH2Q9NW75 528 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 TMEM45AQ9NWC5 275 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 SLC25A37Q9NYZ2 338 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 MAP10Q9P2G4 905 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 COPS7AQ9UBW8 275 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 CAPN7Q9Y6W3 813 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 EXPH5Q8NEV8 1989 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 SNRPB2P08579 225 aaKnown RBP15.09■□□□□ 0.01
LIMS2-217ENST00000545738 FAM87AP0C7U9 286 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 ICAM2P13598 275 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 PRKAG1P54619 331 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 POLE2P56282 527 aa15.09■□□□□ 0.01
LIMS2-217ENST00000545738 RPS26P62854 115 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms