RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 POTEKPQ9BYX7 375 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 CLMPQ9H6B4 373 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 PCDH10Q9P2E7 1040 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 PCDHA9Q9Y5H5 950 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 NPIPB15A6NHN6 443 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-209ENST00000545689 H3BMQ9 156 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 PLGP00747 810 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-209ENST00000545689 GGTA1PQ4G0N0 100 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 GATAD2BQ8WXI9 593 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 SLC41A3Q96GZ6 507 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 COG8Q96MW5 612 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 MRI1Q9BV20 369 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 ZNF717Q9BY31 904 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-209ENST00000545689 NMNAT1Q9HAN9 279 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-209ENST00000545689 ZNF304Q9HCX3 659 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 PLCL2Q9UPR0 1127 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 PIGBOS1A0A0B4J2F0 54 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 FEZF1A0PJY2 475 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 RFPL2O75678 378 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 PRSS56P0CW18 603 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 CST5P28325 142 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-209ENST00000545689 PDHA2P29803 388 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 HOXC13P31276 330 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 RUNX3Q13761 415 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 SGIP1Q9BQI5 828 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 MCCC2Q9HCC0 563 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 TAS2R8Q9NYW2 309 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 UBQLN2Q9UHD9 624 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 RIMS3Q9UJD0 308 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 TCRBV21S2A2A0A5A6 115 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 CCDC85CA6NKD9 419 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 TSPAN4O14817 238 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 SLC16A8O95907 504 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 UCHL1P09936 223 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 H2AFB2P0C5Z0 115 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 CLUP10909 449 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 TYRP1P17643 537 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 SDC1P18827 310 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 GGT2P36268 569 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 FOXA1P55317 472 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 DEFB134Q4QY38 66 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 NCCRP1Q6ZVX7 275 aaPredicted RBP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 GPR149Q86SP6 731 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 ZNF565Q8N9K5 539 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 ZNF300Q96RE9 604 aaPredicted RBP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 NUFIP1Q9UHK0 495 aaKnown RBP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 GPR34Q9UPC5 381 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 SH2B3Q9UQQ2 575 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 NWD2Q9ULI1 1742 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 MEIS3P2A8K0S8 358 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 EEF1E1O43324 174 aaKnown RBP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 SPARCP09486 303 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 H2BFMP0C1H6 154 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 VAMP1P23763 118 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 DUSP3P51452 185 aaPredicted RBP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 PLCXD2Q0VAA5 305 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 SLC25A25Q6KCM7 469 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 OR7G3Q8NG95 312 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 ARRDC2Q8TBH0 407 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 CNOT2Q9NZN8 540 aaKnown RBP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 ENTPD2Q9Y5L3 495 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 ZBTB42B2RXF5 422 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 CHAF1BQ13112 559 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 PHF19Q5T6S3 580 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 KCTD11Q693B1 232 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 RAB12Q6IQ22 244 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 KLBQ86Z14 1044 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 PTCHD1Q96NR3 888 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 CD93Q9NPY3 652 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 INTS6Q9UL03 887 aaKnown RBP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 SPEF1Q9Y4P9 236 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 MAN2B1O00754 1011 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 CNR2P34972 360 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 BMPR1AP36894 532 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 CTBP2P56545 445 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 FGL1Q08830 312 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 NDUFAF5Q5TEU4 345 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 CCBE1Q6UXH8 406 aaPredicted RBP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 ZNF584Q8IVC4 421 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 NAGSQ8N159 534 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 UTP4Q969X6 686 aaKnown RBP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 CASD1Q96PB1 797 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 MEPEQ9NQ76 525 aaPredicted RBP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 PEX12O00623 359 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 EDIL3O43854 480 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 CDC40O60508 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 AK4P27144 223 aaPredicted RBP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 NTSR1P30989 418 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 TCTE1Q5JU00 501 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
COL4A6-209ENST00000545689 UBTD2Q8WUN7 234 aa11.91□□□□□ -0.5
COL4A6-209ENST00000545689 HCRTR2O43614 444 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 DUX1O43812 170 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 ZNF84P51523 738 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 SLC7A9P82251 487 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 PLGLB1Q02325 96 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 TMED4Q7Z7H5 227 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 LHFPL3Q86UP9 236 aa11.9□□□□□ -0.5
COL4A6-209ENST00000545689 RBM12BQ8IXT5 1001 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms