RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 ANKRD28O15084 1053 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 SNX3O60493 162 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 CEACAM4O75871 244 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 DCTN3O75935 186 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 FAM107AO95990 144 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 SEC24CP53992 1094 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 GYS2P54840 703 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 UFM1P61960 85 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 TXNL4AP83876 142 aaKnown RBP12.88□□□□□ -0.35
TSEN54-203ENST00000545228 TP53BP2Q13625 1128 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 RCAN2Q14206 197 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 MAPKAPK3Q16644 382 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 SPDYE7PQ495Y7 208 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 ZNF628Q5EBL2 1059 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 ANKRD26P1Q6NSI1 321 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 ISLR2Q6UXK2 745 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 GPALPP1Q8IXQ4 340 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 TAGAPQ8N103 731 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 APCDD1LQ8NCL9 501 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 OR56A1Q8NGH5 318 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 OR9A2Q8NGT5 310 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 ZNF721Q8TF20 911 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 CTHRC1Q96CG8 243 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 ITCHQ96J02 903 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 MARK4Q96L34 752 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 OR10A5Q9H207 317 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 ZNF71Q9NQZ8 489 aaPredicted RBP12.88□□□□□ -0.35
TSEN54-203ENST00000545228 CCDC167Q9P0B6 97 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 BTNL2Q9UIR0 455 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 ARL2BPQ9Y2Y0 163 aa12.88□□□□□ -0.35
TSEN54-203ENST00000545228 HECTD1Q9ULT8 2610 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 C2orf92A0A1B0GVN3 265 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 WASHC1A8K0Z3 465 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 ANGPT2O15123 496 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 EMC8O43402 210 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 ANP32DO95626 131 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 DDAH2O95865 285 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 IGKV3-11P04433 115 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 LAMP1P11279 417 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 DRD4P21917 467 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 PRIM2P49643 509 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 NME5P56597 212 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 SLC37A1P57057 533 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 RNF4P78317 190 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 FOXK1P85037 733 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 UBAP2LQ14157 1087 aaKnown RBP12.87□□□□□ -0.35
TSEN54-203ENST00000545228 ZNF385BQ569K4 471 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 SPANXN4Q5MJ08 99 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 OR4F3Q6IEY1 312 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 CGB2Q6NT52 195 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 H3F3CQ6NXT2 135 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 ZCCHC12Q6PEW1 402 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 SZRD1Q7Z422 152 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 CPSF7Q8N684 471 aaKnown RBP12.87□□□□□ -0.35
TSEN54-203ENST00000545228 SLC15A4Q8N697 577 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 OR4A15Q8NGL6 344 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 PSMA8Q8TAA3 256 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 SUN3Q8TAQ9 357 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 BRIX1Q8TDN6 353 aaKnown RBP12.87□□□□□ -0.35
TSEN54-203ENST00000545228 TP53INP1Q96A56 240 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 CIDECQ96AQ7 238 aaPredicted RBP12.87□□□□□ -0.35
TSEN54-203ENST00000545228 SPDL1Q96EA4 605 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 ABHD17AQ96GS6 310 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 MS4A4EQ96PG1 132 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 PANX1Q96RD7 426 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 LMF1Q96S06 567 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 RNF32Q9H0A6 362 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 MRTO4Q9UKD2 239 aaKnown RBP12.87□□□□□ -0.35
TSEN54-203ENST00000545228 VPS4AQ9UN37 437 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 YARS2Q9Y2Z4 477 aaKnown RBP12.87□□□□□ -0.35
TSEN54-203ENST00000545228 PCDHGB3Q9Y5G1 929 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 CAPN7Q9Y6W3 813 aa12.87□□□□□ -0.35
TSEN54-203ENST00000545228 NUP214P35658 2090 aaPredicted RBP12.87□□□□□ -0.35
TSEN54-203ENST00000545228 SPTA1P02549 2419 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 MYOCOSA0A1B0GUC4 107 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 BBIP1A8MTZ0 92 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 RFXANKO14593 260 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 ACOX3O15254 700 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 DPM1O60762 260 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 ITGAMP11215 1152 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 GPX3P22352 226 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 SOAT1P35610 550 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 KRT20P35900 424 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 MC3RP41968 323 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 MAGEA8P43361 318 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 GPR143P51810 404 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 PSMD4P55036 377 aaKnown RBP12.86□□□□□ -0.35
TSEN54-203ENST00000545228 RPP38P78345 283 aaKnown RBP12.86□□□□□ -0.35
TSEN54-203ENST00000545228 MRPS22P82650 360 aaKnown RBP12.86□□□□□ -0.35
TSEN54-203ENST00000545228 MFAP5Q13361 173 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 IGFBP7Q16270 282 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 MPEG1Q2M385 716 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 AGKQ53H12 422 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 TCTN3Q6NUS6 607 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 TMEM107Q6UX40 140 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 RPS19BP1Q86WX3 136 aaKnown RBP12.86□□□□□ -0.35
TSEN54-203ENST00000545228 SHISA5Q8N114 240 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 OR2L13Q8N349 312 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 ADCY4Q8NFM4 1077 aa12.86□□□□□ -0.35
TSEN54-203ENST00000545228 UCN3Q969E3 161 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms