RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ZNF681Q96N22 645 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 BBS4Q96RK4 519 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 TTTY12Q9BZ98 90 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 TSPAN10Q9H1Z9 355 aaPredicted RBP10.89□□□□□ -0.67
HDAC4-216ENST00000544989 ZDHHC11Q9H8X9 412 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 MYNNQ9NPC7 610 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 MIEF1Q9NQG6 463 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 SLC35C2Q9NQQ7 365 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 PLSCR2Q9NRY7 297 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 DEPPQ9NTK1 212 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 C1orf109Q9NX04 203 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 QPCTLQ9NXS2 382 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 MAT2BQ9NZL9 334 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.89□□□□□ -0.67
HDAC4-216ENST00000544989 BCAP29Q9UHQ4 241 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 ZNF639Q9UID6 485 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 NPFFR2Q9Y5X5 522 aa10.89□□□□□ -0.67
HDAC4-216ENST00000544989 V9GYY5 206 aaPredicted RBP10.89□□□□□ -0.67
HDAC4-216ENST00000544989 MYO7BQ6PIF6 2116 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 APCP25054 2843 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 E9PLN8 166 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 CTIFO43310 598 aaKnown RBP10.88□□□□□ -0.67
HDAC4-216ENST00000544989 SUSD5O60279 629 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 CDC40O60508 579 aaKnown RBP eCLIP10.88□□□□□ -0.67
HDAC4-216ENST00000544989 SEC22BO75396 215 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 ERLIN1O75477 346 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 SNX4O95219 450 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 CT62P0C5K7 136 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 CCL3P10147 92 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 S1PR1P21453 382 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 GPX3P22352 226 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 MAPK1P28482 360 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 ALDH3A1P30838 453 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 C2orf80Q0P641 193 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 MGAT2Q10469 447 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 ART3Q13508 389 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 SLC10A1Q14973 349 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 C3AR1Q16581 482 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 CMPK2Q5EBM0 449 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 KANK2Q63ZY3 851 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 TMEM211Q6ICI0 200 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 FAM71E1Q6IPT2 247 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 NOXRED1Q6NXP6 359 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 SCIMPQ6UWF3 145 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 LYPD8Q6UX82 237 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 FAM9CQ8IZT9 166 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 SLC34A3Q8N130 599 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 FAM57AQ8TBR7 257 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 PHF10Q8WUB8 498 aaKnown RBP10.88□□□□□ -0.67
HDAC4-216ENST00000544989 EXOSC8Q96B26 276 aaKnown RBP10.88□□□□□ -0.67
HDAC4-216ENST00000544989 ZNF764Q96H86 408 aaPredicted RBP10.88□□□□□ -0.67
HDAC4-216ENST00000544989 LCORQ96JN0 433 aaPredicted RBP10.88□□□□□ -0.67
HDAC4-216ENST00000544989 VKORC1Q9BQB6 163 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 EBPLQ9BY08 206 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 C12orf65Q9H3J6 166 aaKnown RBP10.88□□□□□ -0.67
HDAC4-216ENST00000544989 LRTM1Q9HBL6 345 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 ZFP64Q9NPA5 681 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 TAS2R9Q9NYW1 312 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 HEY2Q9UBP5 337 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 KLF2Q9Y5W3 355 aaPredicted RBP10.88□□□□□ -0.67
HDAC4-216ENST00000544989 ACTL7BQ9Y614 415 aa10.88□□□□□ -0.67
HDAC4-216ENST00000544989 CHCHD2Q9Y6H1 151 aaPredicted RBP10.88□□□□□ -0.67
HDAC4-216ENST00000544989 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.88□□□□□ -0.67
HDAC4-216ENST00000544989 CELSR1Q9NYQ6 3014 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 GTF3C1Q12789 2109 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 A0A087WV62 115 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 A0A1W2PS29 197 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 FRG2CA6NGY1 282 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 ENO4A6NNW6 628 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 BCKDKO14874 412 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 TM9SF1O15321 606 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 TYROBPO43914 113 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 PLOD3O60568 738 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 HCN1O60741 890 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 ZNF354AO60765 605 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-216ENST00000544989 ZG16O60844 167 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 ABCB7O75027 752 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 COQ9O75208 318 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 SPAG7O75391 227 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 IGHG3P01860 377 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 IFI6P09912 130 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 DRD5P21918 477 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 ABCD3P28288 659 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 PTGER1P34995 402 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 RFC3P40938 356 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 PPICP45877 212 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 ASMTP46597 345 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 MRPS22P82650 360 aaKnown RBP10.87□□□□□ -0.67
HDAC4-216ENST00000544989 ZNF844Q08AG5 666 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 FOXO1Q12778 655 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 SNTA1Q13424 505 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 ZNF628Q5EBL2 1059 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 TMEM198Q66K66 360 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 CLEC6AQ6EIG7 209 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 TMEM81Q6P7N7 255 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 LRIG3Q6UXM1 1119 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 NUP54Q7Z3B4 507 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 PACS2Q86VP3 889 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 CCDC116Q8IYX3 515 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 MMP21Q8N119 569 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms