RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SPATA6Q9NWH7 488 aaPredicted RBP5.5□□□□□ -1.53
VPS50-220ENST00000544910 ALG5Q9Y673 324 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 MIA3Q5JRA6 1907 aa5.5□□□□□ -1.53
VPS50-220ENST00000544910 UNC119BA6NIH7 251 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 FAM25EA8MYX2 175 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 KCNJ13O60928 360 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 ENTPD6O75354 484 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 C5AR1P21730 350 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 RORAP35398 523 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 MMP12P39900 470 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 HBA1P69905 142 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 ZNF234Q14588 700 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 TBCEQ15813 527 aaPredicted RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 CTU2Q2VPK5 515 aaKnown RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 BTBD16Q32M84 506 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 HNRNPA1L2Q32P51 320 aaKnown RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 LIPKQ5VXJ0 399 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 PPP2R2DQ66LE6 453 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 FAM180BQ6P0A1 224 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 DUS1LQ6P1R4 473 aaKnown RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 ENTHD1Q8IYW4 607 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 B3GNT7Q8NFL0 401 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 SFXN5Q8TD22 340 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 OR2M4Q96R27 311 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 DPH7Q9BTV6 452 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 BTBD1Q9H0C5 482 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 EPHX3Q9H6B9 360 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 THSD1Q9NS62 852 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 WDR70Q9NW82 654 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 ZNF225Q9UK10 706 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 WDR81Q562E7 1941 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 SLC19A2O60779 497 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 FURINP09958 794 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 S100A12P80511 92 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 RPL19P84098 196 aaKnown RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 CDK3Q00526 305 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 MLLT1Q03111 559 aaPredicted RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 CSTF1Q05048 431 aaKnown RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 ADAM15Q13444 863 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 MADCAM1Q13477 382 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 TCEAL5Q5H9L2 206 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 NDUFAF5Q5TEU4 345 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 LHX8Q68G74 356 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 SLC27A4Q6P1M0 643 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 ZNF551Q7Z340 670 aaPredicted RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 ANKRD33Q7Z3H0 272 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 GID4Q8IVV7 300 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 PSD4Q8NDX1 1056 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 ZNF563Q8TA94 476 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 WDR20Q8TBZ3 569 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 SNX33Q8WV41 574 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 JPH3Q8WXH2 748 aaPredicted RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 ASB12Q8WXK4 309 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 FOXJ1Q92949 421 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 MALT1Q9UDY8 824 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 OR1A2Q9Y585 309 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 C17orf113A0A1B0GUU1 675 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 C12orf71A8MTZ7 269 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 PDCD5O14737 125 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 SLC25A12O75746 678 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 RCBTB2O95199 551 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 CH25HO95992 272 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 PPP2R2BQ00005 443 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 USF2Q15853 346 aaPredicted RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 ITPRIPL2Q3MIP1 535 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 WDR45BQ5MNZ6 344 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 PAMR1Q6UXH9 720 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 HSDL2Q6YN16 418 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 LRRC25Q8N386 305 aaPredicted RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 C12orf76Q8N812 135 aaPredicted RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 MYLIPQ8WY64 445 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 PPP1R14AQ96A00 147 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 ARMC5Q96C12 935 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 CLIP3Q96DZ5 547 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 BARD1Q99728 777 aaKnown RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 PINK1Q9BXM7 581 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 AMBRA1Q9C0C7 1298 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 KCNK12Q9HB15 430 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 ADAP2Q9NPF8 381 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 TRIM36Q9NQ86 728 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 SLC35C2Q9NQQ7 365 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 CNOT2Q9NZN8 540 aaKnown RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 LIPT1Q9Y234 373 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 AGAP5A6NIR3 686 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 HIDE1A8MVS5 230 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 M0R233 179 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 CLDN4O14493 209 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 KAT7O95251 611 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 HLA-DPB1P04440 258 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 ARAFP10398 606 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 PRKACAP17612 351 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 GPX2P18283 190 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 SLC6A11P48066 632 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 SLC13A2Q13183 592 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 ZNF77Q15935 545 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 C2orf27AQ580R0 203 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 RNASE12Q5GAN4 147 aaKnown RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 PRPF38BQ5VTL8 546 aaKnown RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 HAGHLQ6PII5 290 aaPredicted RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 AMIGO1Q86WK6 493 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms