RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 C16orf59Q7L2K0 433 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 CCDC36Q8IYA8 594 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 PARK7Q99497 189 aaKnown RBP12.01□□□□□ -0.49
SMG8-202ENST00000543872 RNF32Q9H0A6 362 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 LYARQ9NX58 379 aaKnown RBP12.01□□□□□ -0.49
SMG8-202ENST00000543872 DCAF16Q9NXF7 216 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 IGLV3-10A0A075B6K4 115 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 SMIM35A0A1B0GVV1 85 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 FZD6O60353 706 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 MAPKAPK2P49137 400 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 RPS26P62854 115 aaKnown RBP12.01□□□□□ -0.49
SMG8-202ENST00000543872 MC1RQ01726 317 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 ZNF791Q3KP31 576 aaPredicted RBP12.01□□□□□ -0.49
SMG8-202ENST00000543872 ARHGAP15Q53QZ3 475 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 C3orf38Q5JPI3 329 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 C3P1Q6ZMU1 363 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 PTGFRNQ9P2B2 879 aa12.01□□□□□ -0.49
SMG8-202ENST00000543872 RUVBL1Q9Y265 456 aaKnown RBP12.01□□□□□ -0.49
SMG8-202ENST00000543872 KLF2Q9Y5W3 355 aaPredicted RBP12.01□□□□□ -0.49
SMG8-202ENST00000543872 GABRPO00591 440 aa12□□□□□ -0.49
SMG8-202ENST00000543872 GATBO75879 557 aaKnown RBP12□□□□□ -0.49
SMG8-202ENST00000543872 TRIM23P36406 574 aa12□□□□□ -0.49
SMG8-202ENST00000543872 ATP6V1E1P36543 226 aa12□□□□□ -0.49
SMG8-202ENST00000543872 SELENOPP49908 381 aa12□□□□□ -0.49
SMG8-202ENST00000543872 LSM11P83369 360 aaKnown RBP eCLIP12□□□□□ -0.49
SMG8-202ENST00000543872 UPP1Q16831 310 aa12□□□□□ -0.49
SMG8-202ENST00000543872 HSD17B12Q53GQ0 312 aa12□□□□□ -0.49
SMG8-202ENST00000543872 ZNF385BQ569K4 471 aa12□□□□□ -0.49
SMG8-202ENST00000543872 GPRC6AQ5T6X5 926 aa12□□□□□ -0.49
SMG8-202ENST00000543872 OR2T4Q8NH00 348 aa12□□□□□ -0.49
SMG8-202ENST00000543872 ATOH1Q92858 354 aaPredicted RBP12□□□□□ -0.49
SMG8-202ENST00000543872 FBXO32Q969P5 355 aa12□□□□□ -0.49
SMG8-202ENST00000543872 ELMOD3Q96FG2 381 aa12□□□□□ -0.49
SMG8-202ENST00000543872 ZNF582Q96NG8 517 aaPredicted RBP12□□□□□ -0.49
SMG8-202ENST00000543872 TTYH1Q9H313 450 aaPredicted RBP12□□□□□ -0.49
SMG8-202ENST00000543872 MRPL15Q9P015 296 aaKnown RBP12□□□□□ -0.49
SMG8-202ENST00000543872 PRKAG2Q9UGJ0 569 aa12□□□□□ -0.49
SMG8-202ENST00000543872 ACSL5Q9ULC5 683 aa12□□□□□ -0.49
SMG8-202ENST00000543872 TMEM5Q9Y2B1 443 aa12□□□□□ -0.49
SMG8-202ENST00000543872 ZFP37Q9Y6Q3 630 aaPredicted RBP12□□□□□ -0.49
SMG8-202ENST00000543872 KCNE1BA0A087WTH5 132 aa12□□□□□ -0.49
SMG8-202ENST00000543872 C7orf66A4D0T2 115 aa12□□□□□ -0.49
SMG8-202ENST00000543872 RAB19A4D1S5 217 aa12□□□□□ -0.49
SMG8-202ENST00000543872 SAP18O00422 153 aaKnown RBP12□□□□□ -0.49
SMG8-202ENST00000543872 OLFM2O95897 454 aa12□□□□□ -0.49
SMG8-202ENST00000543872 ADAP00813 363 aa12□□□□□ -0.49
SMG8-202ENST00000543872 GJA1P17302 382 aa12□□□□□ -0.49
SMG8-202ENST00000543872 SLC6A4P31645 630 aa12□□□□□ -0.49
SMG8-202ENST00000543872 HMGA2P52926 109 aa12□□□□□ -0.49
SMG8-202ENST00000543872 TPBGQ13641 420 aa12□□□□□ -0.49
SMG8-202ENST00000543872 BOP1Q14137 746 aaKnown RBP12□□□□□ -0.49
SMG8-202ENST00000543872 PUM1Q14671 1186 aaKnown RBP eCLIP12□□□□□ -0.49
SMG8-202ENST00000543872 LTB4RQ15722 352 aa12□□□□□ -0.49
SMG8-202ENST00000543872 SLC5A12Q1EHB4 618 aa12□□□□□ -0.49
SMG8-202ENST00000543872 SFRP5Q5T4F7 317 aa12□□□□□ -0.49
SMG8-202ENST00000543872 HMGN2P46Q86SG4 172 aa12□□□□□ -0.49
SMG8-202ENST00000543872 DBF4BQ8NFT6 615 aa12□□□□□ -0.49
SMG8-202ENST00000543872 OR2M2Q96R28 347 aa12□□□□□ -0.49
SMG8-202ENST00000543872 ZCCHC4Q9H5U6 513 aa12□□□□□ -0.49
SMG8-202ENST00000543872 EMC3Q9P0I2 261 aa12□□□□□ -0.49
SMG8-202ENST00000543872 ZNF282Q9UDV7 671 aaPredicted RBP12□□□□□ -0.49
SMG8-202ENST00000543872 DOCK4Q8N1I0 1966 aa12□□□□□ -0.49
SMG8-202ENST00000543872 LRRC72A6NJI9 287 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 DRGXA6NNA5 263 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 PDCD5O14737 125 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 ETHE1O95571 254 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 EIF4EP06730 217 aaKnown RBP11.99□□□□□ -0.49
SMG8-202ENST00000543872 LPLP06858 475 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 H2AFB2P0C5Z0 115 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 OR12D1P0DN82 309 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 IDSP22304 550 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 AHCYP23526 432 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 AOAHP28039 575 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 GABRA5P31644 462 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 LIMS1P48059 325 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 MAZP56270 477 aaKnown RBP11.99□□□□□ -0.49
SMG8-202ENST00000543872 DEFA5Q01523 94 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 CHRNA6Q15825 494 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 ANXA8L1Q5VT79 327 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 ZNF770Q6IQ21 691 aaPredicted RBP11.99□□□□□ -0.49
SMG8-202ENST00000543872 CERS6Q6ZMG9 384 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 PLEKHH3Q7Z736 793 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 RASGRP3Q8IV61 690 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 ZNF687Q8N1G0 1237 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 TOMM5Q8N4H5 51 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 TTC9BQ8N6N2 239 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 HSD17B8Q92506 261 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 HHIPQ96QV1 700 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 OR4K3Q96R72 315 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 REG4Q9BYZ8 158 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 BCL2L14Q9BZR8 327 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 TM6SF2Q9BZW4 377 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 TMEM168Q9H0V1 697 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 SLC6A15Q9H2J7 730 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 DNAJC11Q9NVH1 559 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 SLC39A1Q9NY26 324 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 PFDN2Q9UHV9 154 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 CKAP5Q14008 2032 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 C5orf58C9J3I9 102 aa11.99□□□□□ -0.49
SMG8-202ENST00000543872 SEPT4O43236 478 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms