RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 PTCD3Q96EY7 689 aaKnown RBP4.82□□□□□ -1.64
CLIP1-217ENST00000543205 ZNF578Q96N58 590 aaPredicted RBP4.82□□□□□ -1.64
CLIP1-217ENST00000543205 FCRL4Q96PJ5 515 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 PAIP2Q9BPZ3 127 aaKnown RBP4.82□□□□□ -1.64
CLIP1-217ENST00000543205 AIF1LQ9BQI0 150 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 TEX12Q9BXU0 123 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 NLNQ9BYT8 704 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 ULBP3Q9BZM4 244 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 SPRTNQ9H040 489 aaPredicted RBP4.82□□□□□ -1.64
CLIP1-217ENST00000543205 VIPAS39Q9H9C1 493 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 TMBIM4Q9HC24 238 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 KCNK9Q9NPC2 374 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 SLAMF7Q9NQ25 335 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 FOXJ2Q9P0K8 574 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 PILRAQ9UKJ1 303 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 ACSL6Q9UKU0 697 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 PLLPQ9Y342 182 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 ASB1Q9Y576 335 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 LOC105369274A0A096LPK9 316 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 LOC102723532A0A0G2JNH3 316 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 TRBC2A0A5B9 178 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 FEZF1A0PJY2 475 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 CDRT15L2A8MXV6 281 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 G3V2L1 256 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 H0YGG7 62 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 PEX12O00623 359 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 TXNDC9O14530 226 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 ZSCAN9O15535 394 aaPredicted RBP4.82□□□□□ -1.64
CLIP1-217ENST00000543205 OR1F1O43749 312 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 NRP2O60462 931 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 PEX11AO75192 247 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 SIX3O95343 332 aaPredicted RBP4.82□□□□□ -1.64
CLIP1-217ENST00000543205 PNPP00491 289 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 OPN1MWP04001 364 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 HBQ1P09105 142 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 SBK3P0C264 359 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 OPN1MW2P0DN77 364 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 OPN1MW3P0DN78 364 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 IMPDH1P20839 514 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 PTPRBP23467 1997 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 THBS2P35442 1172 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 ACAA2P42765 397 aaKnown RBP4.82□□□□□ -1.64
CLIP1-217ENST00000543205 GABRA4P48169 554 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 CCNG1P51959 295 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 TRA2BP62995 288 aaKnown RBP4.82□□□□□ -1.64
CLIP1-217ENST00000543205 HERVK_113P63132 956 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 IRF8Q02556 426 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 ASPHQ12797 758 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 CHIT1Q13231 466 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 GRM7Q14831 915 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 KCNMB1Q16558 191 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 RBBP7Q16576 425 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 TBC1D25Q3MII6 688 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 PAGE2BQ5JRK9 111 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 CFAP157Q5JU67 520 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 WASHC2DQ5SRD0 308 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 FRMPD2BQ6IN97 320 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 PWWP2BQ6NUJ5 590 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 EXOC3L1Q86VI1 746 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 KRT73Q86Y46 540 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 PLD3Q8IV08 490 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 COL27A1Q8IZC6 1860 aaPredicted RBP4.82□□□□□ -1.64
CLIP1-217ENST00000543205 OR4N4Q8N0Y3 316 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 POC5Q8NA72 575 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 POMGNT2Q8NAT1 580 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 MFSD9Q8NBP5 474 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 OR4K1Q8NGD4 311 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 MDM1Q8TC05 714 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 TCP10LQ8TDR4 215 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 FGF11Q92914 225 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 ITFG2Q969R8 447 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 WDFY2Q96P53 400 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 FAM111AQ96PZ2 611 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 NAA11Q9BSU3 229 aaPredicted RBP4.82□□□□□ -1.64
CLIP1-217ENST00000543205 NDC1Q9BTX1 674 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 EFCAB11Q9BUY7 163 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 ERVK-6Q9BXR3 956 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 C12orf65Q9H3J6 166 aaKnown RBP4.82□□□□□ -1.64
CLIP1-217ENST00000543205 EHD1Q9H4M9 534 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 LDAHQ9H6V9 325 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 NOL11Q9H8H0 719 aaKnown RBP4.82□□□□□ -1.64
CLIP1-217ENST00000543205 PLEKHA2Q9HB19 425 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 ASCL3Q9NQ33 180 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 STARD5Q9NSY2 213 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 SLC17A7Q9P2U7 560 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 FBLN5Q9UBX5 448 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 EMCNQ9ULC0 261 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 AURKCQ9UQB9 309 aa4.82□□□□□ -1.64
CLIP1-217ENST00000543205 KCNE1BA0A087WTH5 132 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 HYKKA2RU49 373 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 PRSS29PA6NIE9 313 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 C22orf46C9J442 243 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 STMND1H3BQB6 276 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 ACOT7O00154 380 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 E2F3O00716 465 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 ZNF749O43361 778 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 HCRTR1O43613 425 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 TYROBPO43914 113 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 LCMT2O60294 686 aaKnown RBP4.81□□□□□ -1.64
CLIP1-217ENST00000543205 NOL3O60936 208 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms