RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ERLEC1Q96DZ1 483 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 CNRIP1Q96F85 164 aaPredicted RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 TMEM80Q96HE8 168 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 OPALINQ96PE5 141 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 TRNT1Q96Q11 434 aaKnown RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 OR5M11Q96RB7 305 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 CENPOQ9BU64 300 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 MND1Q9BWT6 205 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 KLHL31Q9H511 634 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 SP140LQ9H930 580 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 FBRSQ9HAH7 460 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 MAN2C1Q9NTJ4 1040 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 TRNAU1APQ9NX07 287 aaKnown RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 LYARQ9NX58 379 aaKnown RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 TAS2R16Q9NYV7 291 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 TRPC4Q9UBN4 977 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 CES1P1Q9UKY3 287 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 DOLKQ9UPQ8 538 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 PCDHGA4Q9Y5G9 962 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 PEX16Q9Y5Y5 336 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 DOCK8Q8NF50 2099 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 A0A0G2JN53 185 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 LOC100506127A0A0U1RQW1 187 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 A0A1W2PQU0 124 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 A0A1W2PR48 441 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 H3BN98 237 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 M0R3H8 397 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ARHGAP33O14559 1287 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 SOX14O95416 240 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 AIFM1O95831 613 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 EPPINO95925 133 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 HOXC4P09017 264 aaPredicted RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 DBTP11182 482 aaKnown RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 F3P13726 295 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 GSTM3P21266 225 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 CMPK1P30085 196 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 WASP42768 502 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 TNFRSF4P43489 277 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 MAN2A2P49641 1150 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 STXBP1P61764 594 aaKnown RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 PRR5P85299 388 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ZNF91Q05481 1191 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 CDC20Q12834 499 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 TARDBPQ13148 414 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 KRT33BQ14525 404 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 MED22Q15528 200 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 SSX1Q16384 188 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 RPE65Q16518 533 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 TSTQ16762 297 aaKnown RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 SWI5Q1ZZU3 235 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ITPRIPL2Q3MIP1 535 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 WDR45BQ5MNZ6 344 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ENTPD8Q5MY95 495 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 TPRG1LQ5T0D9 272 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 C1orf94Q6P1W5 598 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 PODNL1Q6PEZ8 512 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 SZRD1Q7Z422 152 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 COMTD1Q86VU5 262 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 RBM12BQ8IXT5 1001 aaKnown RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 FBXL6Q8N531 539 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 FAM26EQ8N5C1 309 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 MORN4Q8NDC4 146 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ST13P5Q8NFI4 369 aaPredicted RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 OR8K5Q8NH50 307 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 RNF217Q8TC41 542 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ASB12Q8WXK4 309 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 WFDC6Q9BQY6 131 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 CHCHD6Q9BRQ6 235 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 FNDC11Q9BVV2 318 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 SLC17A9Q9BYT1 436 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 PLA2G2FQ9BZM2 168 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 SIAEQ9HAT2 523 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 CPNE5Q9HCH3 593 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 CHCHD3Q9NX63 227 aaKnown RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 CALML5Q9NZT1 146 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 ATG4BQ9Y4P1 393 aa6.17□□□□□ -1.42
PTPRO-208ENST00000542557 MN1Q10571 1320 aaPredicted RBP6.17□□□□□ -1.42
PTPRO-208ENST00000542557 A0A075B6Q4 140 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 OR52A4PA6NMU1 304 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 PDZK1P1A8MUH7 402 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 EMC8O43402 210 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 HMGN2P05204 90 aaKnown RBP6.16□□□□□ -1.42
PTPRO-208ENST00000542557 IMPDH2P12268 514 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 CSNK2A2P19784 350 aaPredicted RBP6.16□□□□□ -1.42
PTPRO-208ENST00000542557 NDUFS1P28331 727 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 S100A5P33763 92 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 SOX6P35712 828 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 KIR2DL1P43626 348 aaPredicted RBP6.16□□□□□ -1.42
PTPRO-208ENST00000542557 PCYT1AP49585 367 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 TGM3Q08188 693 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 PIN1Q13526 163 aaPredicted RBP6.16□□□□□ -1.42
PTPRO-208ENST00000542557 LASP1Q14847 261 aaKnown RBP6.16□□□□□ -1.42
PTPRO-208ENST00000542557 GPR19Q15760 415 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 LYSMD2Q8IV50 215 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 PROKR2Q8NFJ6 384 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 OR4K5Q8NGD3 323 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 FGF11Q92914 225 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 GAL3ST3Q96A11 431 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 SLC6A18Q96N87 628 aa6.16□□□□□ -1.42
PTPRO-208ENST00000542557 IL4I1Q96RQ9 567 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms