RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 TBC1D1Q86TI0 1168 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 NUDT13Q86X67 352 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 PLD6Q8N2A8 252 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 HGDQ93099 445 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 TP53INP1Q96A56 240 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 MRRFQ96E11 262 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 HSPBAP1Q96EW2 488 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 TMEM41AQ96HV5 264 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 NSUN5Q96P11 429 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 NAPGQ99747 312 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 ITPAQ9BY32 194 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 MRPL1Q9BYD6 325 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 IPPKQ9H8X2 491 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 SNX15Q9NRS6 342 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 WHRNQ9P202 907 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 ADGRE2Q9UHX3 823 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 PCDHGA11Q9Y5H2 935 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 EIF3HO15372 352 aaKnown RBP eCLIP14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 SIAH2O43255 324 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 C2P06681 752 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 GFAPP14136 432 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 KEAP1Q14145 624 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 LUZP2Q86TE4 346 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 PACS2Q86VP3 889 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 CCDC25Q86WR0 208 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 L3MBTL4Q8NA19 623 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 FBXO25Q8TCJ0 367 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 ABTB1Q969K4 478 aaPredicted RBP14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 SERHLQ9NQF3 203 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 GALNT8Q9NY28 637 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 CPSF2Q9P2I0 782 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 MAPRE3Q9UPY8 281 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 ANGPTL3Q9Y5C1 460 aa14.08□□□□□ -0.16
CLSTN3-213ENST00000541953 SNPHO15079 494 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 PPM1BO75688 479 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 SNX4O95219 450 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 KLK1P06870 262 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 TMIGD3P0DMS9 266 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 CPMP14384 443 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 FOSL1P15407 271 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 NT5EP21589 574 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 PIK3R1P27986 724 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 CRABP2P29373 138 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 PEX19P40855 299 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 XKP51811 444 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 ARFIP1P53367 373 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 ALDH18A1P54886 795 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 PLTPP55058 493 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 DCAF7P61962 342 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 SORDQ00796 357 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 TRAF3Q13114 568 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 PCBP2Q15366 365 aaKnown RBP eCLIP14.07□□□□□ -0.164e-7■■■□□ 16.9
CLSTN3-213ENST00000541953 LTB4RQ15722 352 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 MROH9Q5TGP6 573 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 FBXW10Q5XX13 1052 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 HLA-DQA1Q5Y7H0 255 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 CAMKMTQ7Z624 323 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 ADGRE4PQ86SQ3 457 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 CXorf67Q86X51 503 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 PM20D2Q8IYS1 436 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 GCNT2Q8N0V5 402 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 WDSUB1Q8N9V3 476 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 ADCY4Q8NFM4 1077 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 RHEBL1Q8TAI7 183 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 RDH11Q8TC12 318 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 SECISBP2Q96T21 854 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 CENPKQ9BS16 269 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 NOL11Q9H8H0 719 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 ANKRA2Q9H9E1 313 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 ZBTB26Q9HCK0 441 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 FARSBQ9NSD9 589 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 MAT2BQ9NZL9 334 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 FOXD3Q9UJU5 478 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 CES1P1Q9UKY3 287 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 PYCARDQ9ULZ3 195 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 ACOT9Q9Y305 439 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 WIF1Q9Y5W5 379 aa14.07□□□□□ -0.16
CLSTN3-213ENST00000541953 FOXE1O00358 373 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 PPP6CO00743 305 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 ICOSLGO75144 302 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 UGT2B11O75310 529 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 CBX7O95931 251 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 ALDOAP04075 364 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 CTAGE8P0CG41 777 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 MAGEA4P43358 317 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 STARP49675 285 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 GUCY2DQ02846 1103 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 SRYQ05066 204 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 ILF2Q12905 390 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 CALCOCO2Q13137 446 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 PRICKLE4Q2TBC4 344 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 TECRLQ5HYJ1 363 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 CTAGE4Q8IX94 777 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 CIARTQ8N365 385 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 PTGR2Q8N8N7 351 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 C7orf57Q8NEG2 295 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 OR4K14Q8NGD5 310 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 OR1J4Q8NGS1 313 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 OMA1Q96E52 524 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 RBM24Q9BX46 236 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms