RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 FAM120CQ9NX05 1096 aaKnown RBP17.41■□□□□ 0.38
VPS33A-205ENST00000541169 NTMQ9P121 344 aa17.41■□□□□ 0.38
VPS33A-205ENST00000541169 IGSF10Q6WRI0 2623 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 SLC22A3O75751 556 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 LAMP1P11279 417 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 NAGAP17050 411 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 DRD5P21918 477 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 TNFSF10P50591 281 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 PRR5P85299 388 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 PGS1Q32NB8 556 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 TRMT12Q53H54 448 aaKnown RBP17.4■□□□□ 0.38
VPS33A-205ENST00000541169 SOWAHCQ53LP3 525 aaPredicted RBP17.4■□□□□ 0.38
VPS33A-205ENST00000541169 RPUSD3Q6P087 351 aaKnown RBP17.4■□□□□ 0.38
VPS33A-205ENST00000541169 ZCCHC12Q6PEW1 402 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 FAM111BQ6SJ93 734 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 MIER2Q8N344 545 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 KRTCAP2Q8N6L1 136 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 ZNF321PQ8N8H1 164 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 OR52R1Q8NGF1 315 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 C16orf52Q8NHV5 167 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 ASB15Q8WXK1 588 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 TMEM125Q96AQ2 219 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 HSPBAP1Q96EW2 488 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 OR52B2Q96RD2 323 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.4■□□□□ 0.38
VPS33A-205ENST00000541169 NPHS2Q9NP85 383 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 ATMQ13315 3056 aa17.4■□□□□ 0.38
VPS33A-205ENST00000541169 PRSS51A0A1B0GVH4 220 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 TMEM200CA6NKL6 621 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 HRKO00198 91 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 OR2J2O76002 312 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 CBX7O95931 251 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 CLPSP04118 112 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 CD46P15529 392 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 S100A3P33764 101 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 PPICP45877 212 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 EMDP50402 254 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 ATP4BP51164 291 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 MRPS35P82673 323 aaKnown RBP17.39■□□□□ 0.37
VPS33A-205ENST00000541169 OC90Q02509 493 aaPredicted RBP17.39■□□□□ 0.37
VPS33A-205ENST00000541169 DUSP2Q05923 314 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 NFATC3Q12968 1075 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 HSPB3Q12988 150 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 TUBA3CQ13748 450 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 ZNF169Q14929 603 aaPredicted RBP17.39■□□□□ 0.37
VPS33A-205ENST00000541169 ZNHIT3Q15649 155 aaPredicted RBP17.39■□□□□ 0.37
VPS33A-205ENST00000541169 LTB4RQ15722 352 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 VPS26BQ4G0F5 336 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 FHL5Q5TD97 284 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 FCRLBQ6BAA4 426 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 ANKRD26P1Q6NSI1 321 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 FAM180BQ6P0A1 224 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 TUBA3EQ6PEY2 450 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 TMEM64Q6YI46 380 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 RBMXL3Q8N7X1 1067 aaKnown RBP17.39■□□□□ 0.37
VPS33A-205ENST00000541169 GOLM1Q8NBJ4 401 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 TMEM178AQ8NBL3 297 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 OR7G2Q8NG99 324 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 THAP3Q8WTV1 239 aaPredicted RBP17.39■□□□□ 0.37
VPS33A-205ENST00000541169 KAT2AQ92830 837 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 CIDECQ96AQ7 238 aaPredicted RBP17.39■□□□□ 0.37
VPS33A-205ENST00000541169 RILPQ96NA2 401 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 GAL3ST4Q96RP7 486 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 RASL10BQ96S79 203 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 NPAS2Q99743 824 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 SLAMF7Q9NQ25 335 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 FGFR1OP2Q9NVK5 253 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 HEMK1Q9Y5R4 338 aaPredicted RBP17.39■□□□□ 0.37
VPS33A-205ENST00000541169 PIEZO2Q9H5I5 2752 aa17.39■□□□□ 0.37
VPS33A-205ENST00000541169 A8MVJ9 347 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 K7EM74 188 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 GPX3P22352 226 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 CD96P40200 585 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 PRSS53Q2L4Q9 553 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 ZNF385BQ569K4 471 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 SLC6A19Q695T7 634 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 TMEM107Q6UX40 140 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 MSANTD1Q6ZTZ1 278 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 ZNF551Q7Z340 670 aaPredicted RBP17.38■□□□□ 0.37
VPS33A-205ENST00000541169 ZNF441Q8N8Z8 693 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 ADIPOR1Q96A54 375 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 CHMP6Q96FZ7 201 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 LCORQ96JN0 433 aaPredicted RBP17.38■□□□□ 0.37
VPS33A-205ENST00000541169 C5orf34Q96MH7 638 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 BBC3Q96PG8 261 aaPredicted RBP17.38■□□□□ 0.37
VPS33A-205ENST00000541169 BTBD9Q96Q07 612 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 ZBTB20Q9HC78 741 aaPredicted RBP17.38■□□□□ 0.37
VPS33A-205ENST00000541169 HPF1Q9NWY4 346 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 LRFN1Q9P244 771 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 ERVK-11Q9UQG0 969 aa17.38■□□□□ 0.37
VPS33A-205ENST00000541169 TNRC6AQ8NDV7 1962 aaKnown RBP17.37■□□□□ 0.37
VPS33A-205ENST00000541169 A0A0G2JND7 137 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 FRG2CA6NGY1 282 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 B8ZZF3 427 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 WWP2O00308 870 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 UPK1AO00322 258 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 TO15178 435 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 EMC8O43402 210 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 PRKNO60260 465 aaPredicted RBP17.37■□□□□ 0.37
VPS33A-205ENST00000541169 PSMG1O95456 288 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms