RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 ALDH9A1P49189 494 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 DIO3P55073 304 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 PLIN5Q00G26 463 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 ZNF763Q0D2J5 394 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 ZNF267Q14586 743 aaPredicted RBP13.17□□□□□ -0.3
LTBR-209ENST00000541102 ATP6AP1LQ52LC2 224 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 KRTCAP3Q53RY4 240 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 IL23RQ5VWK5 629 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 ANKRD26P1Q6NSI1 321 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 LARP4Q71RC2 724 aaKnown RBP eCLIP13.17□□□□□ -0.3
LTBR-209ENST00000541102 MAMDC2Q7Z304 686 aaPredicted RBP13.17□□□□□ -0.3
LTBR-209ENST00000541102 LIX1Q8N485 282 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 ARFGAP2Q8N6H7 521 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 RELTQ969Z4 430 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 PPP3R2Q96LZ3 170 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 TSSK3Q96PN8 268 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 MYNNQ9NPC7 610 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 USH1CQ9Y6N9 552 aa13.17□□□□□ -0.3
LTBR-209ENST00000541102 MAST4O15021 2626 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 AKAP10O43572 662 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 SLC19A2O60779 497 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 EDF1O60869 148 aaKnown RBP13.16□□□□□ -0.3
LTBR-209ENST00000541102 ALDOCP09972 364 aaKnown RBP13.16□□□□□ -0.3
LTBR-209ENST00000541102 SOX18P35713 384 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 CASP6P55212 293 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 TRA2BP62995 288 aaKnown RBP13.16□□□□□ -0.3
LTBR-209ENST00000541102 ERVK-8P63133 956 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 HSF1Q00613 529 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 C2orf80Q0P641 193 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 SF3A3Q12874 501 aaKnown RBP eCLIP13.16□□□□□ -0.3
LTBR-209ENST00000541102 PTGR1Q14914 329 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 TMEM198Q66K66 360 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 OR52E8Q6IFG1 317 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 CGB2Q6NT52 195 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 SLC48A1Q6P1K1 146 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 EPGNQ6UW88 154 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 SIAH3Q8IW03 269 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 ST13P4Q8IZP2 240 aaPredicted RBP13.16□□□□□ -0.3
LTBR-209ENST00000541102 KRTCAP2Q8N6L1 136 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 FNDC5Q8NAU1 212 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 OR8K3Q8NH51 312 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 RFWD2Q8NHY2 731 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 RIT1Q92963 219 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 MAGED4Q96JG8 741 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 ART5Q96L15 291 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 MARK4Q96L34 752 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 CCT7Q99832 543 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 EBF4Q9BQW3 602 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 FAM53CQ9NYF3 392 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 ERVK-19Q9WJR5 959 aa13.16□□□□□ -0.3
LTBR-209ENST00000541102 CROCCQ5TZA2 2017 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 C1orf226A1L170 272 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 G3V3Y1 287 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 TFECO14948 347 aaPredicted RBP13.15□□□□□ -0.3
LTBR-209ENST00000541102 ZNF354AO60765 605 aaPredicted RBP13.15□□□□□ -0.3
LTBR-209ENST00000541102 DIAPH2O60879 1101 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 IGKV3-11P04433 115 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 SLC35E2P0CK97 266 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 G6PDP11413 515 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 PIK3R1P27986 724 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 FEN1P39748 380 aaKnown RBP13.15□□□□□ -0.3
LTBR-209ENST00000541102 CA7P43166 264 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 IDH3AP50213 366 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 XKP51811 444 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 EMX2Q04743 252 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 C3AR1Q16581 482 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 MPEG1Q2M385 716 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.15□□□□□ -0.3
LTBR-209ENST00000541102 ZNF385BQ569K4 471 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 OPN5Q6U736 354 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 TICAM1Q8IUC6 712 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 C9orf40Q8IXQ3 194 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 GPALPP1Q8IXQ4 340 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 POGLUT1Q8NBL1 392 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 PSD4Q8NDX1 1056 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 OR4K14Q8NGD5 310 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 EXOSC8Q96B26 276 aaKnown RBP13.15□□□□□ -0.3
LTBR-209ENST00000541102 CNRIP1Q96F85 164 aaPredicted RBP13.15□□□□□ -0.3
LTBR-209ENST00000541102 FBXL20Q96IG2 436 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 METTL2AQ96IZ6 378 aaKnown RBP13.15□□□□□ -0.3
LTBR-209ENST00000541102 MAELQ96JY0 434 aaKnown RBP13.15□□□□□ -0.3
LTBR-209ENST00000541102 ZNF681Q96N22 645 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 GAL3ST4Q96RP7 486 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 PELOQ9BRX2 385 aaKnown RBP13.15□□□□□ -0.3
LTBR-209ENST00000541102 DEPPQ9NTK1 212 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 FGFR1OP2Q9NVK5 253 aa13.15□□□□□ -0.3
LTBR-209ENST00000541102 SUCOQ9UBS9 1254 aaKnown RBP13.15□□□□□ -0.3
LTBR-209ENST00000541102 TRPC5OSA6NMA1 111 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 HS6ST1O60243 411 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 ERAL1O75616 437 aaKnown RBP13.14□□□□□ -0.31
LTBR-209ENST00000541102 PDE9AO76083 593 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 ESRRAP11474 423 aaPredicted RBP13.14□□□□□ -0.31
LTBR-209ENST00000541102 ABOP16442 354 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 DDCP20711 480 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 EFNA1P20827 205 aaPredicted RBP13.14□□□□□ -0.31
LTBR-209ENST00000541102 AQP5P55064 265 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 PLGLB1Q02325 96 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 LTB4RQ15722 352 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 LSM12Q3MHD2 195 aaKnown RBP13.14□□□□□ -0.31
LTBR-209ENST00000541102 PIGGQ5H8A4 983 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms