RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 GIPRP48546 466 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 SNRPGP62308 76 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 MLLT11Q13015 90 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ADIPOR2Q86V24 386 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 NR2C2APQ86WQ0 139 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 SFTPA1Q8IWL2 248 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC38A6Q8IZM9 456 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 DNAJC5GQ8N7S2 189 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 PROKR2Q8NFJ6 384 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 SETD6Q8TBK2 473 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 DEDD2Q8WXF8 326 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 MTERF3Q96E29 417 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 KCTD7Q96MP8 289 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 TTTY10Q9BZA0 68 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 SIRT3Q9NTG7 399 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 KLHL42Q9P2K6 505 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC25A13Q9UJS0 675 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 GPR55Q9Y2T6 319 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 BACE2Q9Y5Z0 518 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 WNT6Q9Y6F9 365 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ALPK2Q86TB3 2170 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 MTCL1Q9Y4B5 1905 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 IQCMA0A1B0GVH7 501 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZSCAN5BA6NJL1 495 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 H7BY64 318 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 EIF3FO00303 357 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 ICMTO60725 284 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 IFNA14P01570 189 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 HSD3B1P14060 373 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 HSD3B2P26439 372 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 UQCRC1P31930 480 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 RECQLP46063 649 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 MAP2K3P46734 347 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 GAS1P54826 345 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 CLDN2P57739 230 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 FAPQ12884 760 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 NCF4Q15080 339 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 TRIQKQ629K1 86 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZNF57Q68EA5 555 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 LAMTOR1Q6IAA8 161 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 TTC23LQ6PF05 361 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 NXPE4Q6UWF7 544 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 DGLUCYQ7Z3D6 616 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZNF547Q8IVP9 402 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 C16orf58Q96GQ5 468 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 FOPNLQ96NB1 174 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 PRAP1Q96NZ9 151 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZNF717Q9BY31 904 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR51I1Q9H343 314 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 MYNNQ9NPC7 610 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 SPG21Q9NZD8 308 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 MAT2BQ9NZL9 334 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC23A1Q9UHI7 598 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 PPIL1Q9Y3C6 166 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 LAMA1P25391 3075 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 ARID1BQ8NFD5 2236 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 FAM240BA0A1B0GVZ2 78 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 CPSF4LA6NMK7 179 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 RAB36O95755 333 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 OLFM2O95897 454 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 LIMS3P0CW19 117 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 LIMS4P0CW20 117 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 PIPP12273 146 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 PEPDP12955 493 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 TYRP14679 529 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 ENDOUP21128 410 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 UQCRC2P22695 453 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 PRLHRP49683 370 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 GNG2P59768 71 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 WSCD2Q2TBF2 565 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 LY6G5CQ5SRR4 150 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 XKRXQ6PP77 449 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR4M2Q8NGB6 313 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 FAM46AQ96IP4 442 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 TRMT61BQ9BVS5 477 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 ELAC1Q9H777 363 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 ASF1AQ9Y294 204 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 SF3B6Q9Y3B4 125 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 NOTCH4Q99466 2003 aa9.78□□□□□ -0.84
CDC42SE1-207ENST00000540998 TRAV6A0A075B6T7 132 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 MPZL2O60487 215 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 ERAL1O75616 437 aaKnown RBP9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 SOD2P04179 222 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 NR2F1P10589 423 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 TFPIP10646 304 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 CYP2A6P11509 494 aaPredicted RBP9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 MYL12AP19105 171 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 PTX3P26022 381 aaPredicted RBP9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC9A3P48764 834 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 SRP9P49458 86 aaKnown RBP9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 STXBP1P61764 594 aaKnown RBP9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 CSTF1Q05048 431 aaKnown RBP9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 DUSP2Q05923 314 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZNF730Q6ZMV8 503 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 ADCK2Q7Z695 626 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC9B2Q86UD5 537 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 MARCH9Q86YJ5 346 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 C19orf18Q8NEA5 215 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 GRPEL2Q8TAA5 225 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 NACC2Q96BF6 587 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms