RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 OR52E6Q96RD3 313 aa16.29■□□□□ 0.2
CLSTN3-210ENST00000540931 ELAC2Q9BQ52 826 aaKnown RBP16.29■□□□□ 0.2
CLSTN3-210ENST00000540931 NTMQ9P121 344 aa16.29■□□□□ 0.2
CLSTN3-210ENST00000540931 BCAP29Q9UHQ4 241 aa16.29■□□□□ 0.2
CLSTN3-210ENST00000540931 COPG1Q9Y678 874 aaKnown RBP16.29■□□□□ 0.2
CLSTN3-210ENST00000540931 C2orf92A0A1B0GVN3 265 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 ACOX3O15254 700 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 EMC8O43402 210 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 FAM107AO95990 144 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 DRD4P21917 467 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 GPX3P22352 226 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 TMED10P49755 219 aaKnown RBP16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 ANXA11P50995 505 aaKnown RBP16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 SEC24CP53992 1094 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 GYS2P54840 703 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 KCNAB2Q13303 367 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 MFAP5Q13361 173 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 RCAN2Q14206 197 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 MAPKAPK3Q16644 382 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 GKAP1Q5VSY0 366 aaPredicted RBP16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 IGFL3Q6UXB1 125 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 ANKS4BQ8N8V4 417 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 OR9A2Q8NGT5 310 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 C10orf82Q8WW14 230 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 EXTL1Q92935 676 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 HSPBAP1Q96EW2 488 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 THOC1Q96FV9 657 aaKnown RBP16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 ITCHQ96J02 903 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 CCDC115Q96NT0 180 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 STMN3Q9NZ72 180 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 MYOTQ9UBF9 498 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 MRTO4Q9UKD2 239 aaKnown RBP16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 PCDHGB3Q9Y5G1 929 aa16.28■□□□□ 0.2
CLSTN3-210ENST00000540931 ATMQ13315 3056 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 NAV2Q8IVL1 2488 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 CCDC154A6NI56 674 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 A8MUI8 341 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 DPM1O60762 260 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 ITGAMP11215 1152 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 TRPC1P48995 793 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 PRIM2P49643 509 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 Q0VFX4 171 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 MGAT2Q10469 447 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 HSPB3Q12988 150 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 TP53BP2Q13625 1128 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 ZNF385BQ569K4 471 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 SPANXN4Q5MJ08 99 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 ACER2Q5QJU3 275 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 OR4F3Q6IEY1 312 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 ANKRD26P1Q6NSI1 321 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 CGB2Q6NT52 195 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 BLOC1S3Q6QNY0 202 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 OPN5Q6U736 354 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 ZADH2Q8N4Q0 377 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 FDCSPQ8NFU4 85 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 GOT1L1Q8NHS2 421 aaPredicted RBP16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 C9orf43Q8TAL5 461 aaPredicted RBP16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 BRIX1Q8TDN6 353 aaKnown RBP16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 TTC9Q92623 222 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 FAM107BQ9H098 131 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 ZNF552Q9H707 407 aaPredicted RBP16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 GIN1Q9NXP7 522 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 ARL2BPQ9Y2Y0 163 aa16.27■□□□□ 0.2
CLSTN3-210ENST00000540931 DUXAA6NLW8 204 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 J3QKU1 62 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 DCTN3O75935 186 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 AGR2O95994 175 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 NAGAP17050 411 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 S1PR1P21453 382 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 DRD5P21918 477 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 UQCRC2P22695 453 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 SOX11P35716 441 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 PPICP45877 212 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 CCT3P49368 545 aaKnown RBP16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 RPP38P78345 283 aaKnown RBP16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 MRPS22P82650 360 aaKnown RBP16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 ZNF750Q32MQ0 723 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 SPDYE7PQ495Y7 208 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 AGKQ53H12 422 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 TRMT12Q53H54 448 aaKnown RBP16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 PAOXQ6QHF9 649 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 IGFL2Q6UWQ7 119 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 PIGWQ7Z7B1 504 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 ZNF615Q8N8J6 731 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 CDRT4Q8N9R6 151 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 ADCY4Q8NFM4 1077 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 OR52R1Q8NGF1 315 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 HAS2Q92819 552 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 CIDECQ96AQ7 238 aaPredicted RBP16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 MS4A4EQ96PG1 132 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 PANX1Q96RD7 426 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 CCT8L2Q96SF2 557 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 NUDT9Q9BW91 350 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 HHATLQ9HCP6 504 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 CCDC167Q9P0B6 97 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 VPS4AQ9UN37 437 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 HEMK1Q9Y5R4 338 aaPredicted RBP16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 MYO18BQ8IUG5 2567 aa16.26■□□□□ 0.19
CLSTN3-210ENST00000540931 MYOCOSA0A1B0GUC4 107 aa16.25■□□□□ 0.19
CLSTN3-210ENST00000540931 A0A1W2PP18 115 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms