RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ZC3H10Q96K80 434 aaKnown RBP11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 ZNF300Q96RE9 604 aaPredicted RBP11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 CD180Q99467 661 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 Q9H521 79 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 C3orf14Q9HBI5 128 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 CAPN10Q9HC96 672 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 DDX18Q9NVP1 670 aaKnown RBP11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 USE1Q9NZ43 259 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 SEMA5BQ9P283 1151 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 CLCA2Q9UQC9 943 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 GPC6Q9Y625 555 aaPredicted RBP11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 MAU2Q9Y6X3 613 aa11.49□□□□□ -0.57
AP003559.1-201ENST00000540906 VPS13AQ96RL7 3174 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 FER1L5A0AVI2 2057 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 A0A1W2PQM1 296 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 TMEM150CB9EJG8 249 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 FFAR1O14842 300 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 HS6ST1O60243 411 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 PCDHGA12O60330 932 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 NSA2O95478 260 aaKnown RBP11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 NR2F1P10589 423 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 NT5EP21589 574 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 CAPGP40121 348 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 GPR3P46089 330 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 GCGRP47871 477 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 EFNA3P52797 238 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 PRR5P85299 388 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 CHRNEQ04844 493 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 FOXD4Q12950 439 aaPredicted RBP11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 ELOAQ14241 798 aaKnown RBP11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 PRICKLE4Q2TBC4 344 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 EXOSC6Q5RKV6 272 aaKnown RBP11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 TSPYL5Q86VY4 417 aaPredicted RBP11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 TMEM151BQ8IW70 566 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 SLC30A8Q8IWU4 369 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 EID2Q8N6I1 236 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 OR4C15Q8NGM1 316 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 CDS1Q92903 461 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 MMABQ96EY8 250 aaPredicted RBP11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 SLC41A2Q96JW4 573 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 CHRNA10Q9GZZ6 450 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 GABARAPL1Q9H0R8 117 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 SLC38A1Q9H2H9 487 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 PRDM9Q9NQV7 894 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 THUMPD1Q9NXG2 353 aaKnown RBP11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 RHCGQ9UBD6 479 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 SUSD2Q9UGT4 822 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 SAMHD1Q9Y3Z3 626 aaKnown RBP11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 LYVE1Q9Y5Y7 322 aa11.48□□□□□ -0.57
AP003559.1-201ENST00000540906 CUL9Q8IWT3 2517 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 DPPA5A6NC42 116 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 FCMRO60667 390 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 H6PDO95479 791 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 CBX7O95931 251 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 HPRP00739 348 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 ATP1B1P05026 303 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 FESP07332 822 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 FPR1P21462 350 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 MYF6P23409 242 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 XCR1P46094 333 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 OR1D4P47884 311 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 KCNJ5P48544 419 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 PDX1P52945 283 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 CCL7P80098 99 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 HSD11B2P80365 405 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 DUSP5Q16690 384 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 USP51Q70EK9 711 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 GALNT5Q7Z7M9 940 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 ARMC8Q8IUR7 673 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 D2HGDHQ8N465 521 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 DHRSXQ8N5I4 330 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 OR52J3Q8NH60 311 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 TANKQ92844 425 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 POP5Q969H6 163 aaKnown RBP11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 MOAP1Q96BY2 351 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 MS4A4EQ96PG1 132 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 ACTRT3Q9BYD9 372 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 ADAP2Q9NPF8 381 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 THSD1Q9NS62 852 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 PDP1Q9P0J1 537 aaPredicted RBP11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 DHCR7Q9UBM7 475 aaKnown RBP11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 C19orf53Q9UNZ5 99 aaPredicted RBP11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 CHST2Q9Y4C5 530 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 SPACA6W5XKT8 324 aa11.47□□□□□ -0.57
AP003559.1-201ENST00000540906 CENPVL1A0A0U1RR11 272 aa11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 A6NHS1 94 aa11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 M0R3H8 397 aa11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 OR2B3O76000 313 aa11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 RNH1P13489 461 aaKnown RBP11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 MAOAP21397 527 aa11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 S1PR1P21453 382 aa11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 AVPR2P30518 371 aa11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 DNAJA1P31689 397 aaKnown RBP11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 GTF2A1P52655 376 aaPredicted RBP11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 CDH12P55289 794 aa11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 GPLD1P80108 840 aa11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 FAM53BQ14153 422 aa11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 GANABQ14697 944 aaKnown RBP11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 NDUFA9Q16795 377 aa11.46□□□□□ -0.57
AP003559.1-201ENST00000540906 GPAT3Q53EU6 434 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms