RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 TFB1MQ8WVM0 346 aaKnown RBP3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 HTR3CQ8WXA8 447 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 P3H4Q92791 437 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PIGTQ969N2 578 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 DTD2Q96FN9 168 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 OXNAD1Q96HP4 312 aaPredicted RBP3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 COX14Q96I36 57 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SERAC1Q96JX3 654 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 C7orf26Q96N11 449 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SPATA13Q96N96 652 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ZNF830Q96NB3 372 aaPredicted RBP3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 MAK16Q9BXY0 300 aaKnown RBP3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 FRMD8P1Q9BZ68 369 aaPredicted RBP3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 GBA3Q9H227 469 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 BRF2Q9HAW0 419 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 NT5MQ9NPB1 228 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 MBNL1Q9NR56 388 aaKnown RBP3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 HAUS2Q9NVX0 235 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 DNPEPQ9ULA0 475 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 GUCA1BQ9UMX6 200 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CA5BQ9Y2D0 317 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 R3HDM2Q9Y2K5 976 aaKnown RBP3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 HEY1Q9Y5J3 304 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CEPT1Q9Y6K0 416 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 U3KQA8 63 aa3.81□□□□□ -1.8
SOX9-AS1-214ENST00000540802 IGSF10Q6WRI0 2623 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TLN1Q9Y490 2541 aaKnown RBP3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 RGSL1A5PLK6 1076 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 FAM47DPA6NHR8 397 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PMS2P5A8MQ11 134 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 AGAP14A8MT82 685 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 GAPDHSO14556 408 aaPredicted RBP3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SLC31A1O15431 190 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 FLRT2O43155 660 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 RECQL5O94762 991 aaPredicted RBP3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TMEM63AO94886 807 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 KCNK5O95279 499 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CSF2P04141 144 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 THEGLP0DJG4 465 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CEACAM1P13688 526 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 HLA-DPA1P20036 260 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 NR1D1P20393 614 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CA4P22748 312 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 MAT2AP31153 395 aaKnown RBP3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CDAP32320 146 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 HMGCLP35914 325 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CD86P42081 329 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 MAGEA6P43360 314 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 HOXA1P49639 335 aaPredicted RBP3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ISL1P61371 349 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 DYNLT1P63172 113 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 AP1B1Q10567 949 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TMEM115Q12893 351 aaPredicted RBP3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 GAGE5Q13069 117 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 GAGE6Q13070 117 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SLC1A5Q15758 541 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TSTQ16762 297 aaKnown RBP3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ANKRD20A2Q5SQ80 823 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PDSS1Q5T2R2 415 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ANKRD20A1Q5TYW2 823 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ANKRD20A3Q5VUR7 823 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 FRG2Q64ET8 278 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 LRRC66Q68CR7 880 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 KCTD16Q68DU8 428 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 KDM7AQ6ZMT4 941 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TSPAN33Q86UF1 283 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 HAPLN4Q86UW8 402 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PARGQ86W56 976 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 KRTAP7-1Q8IUC3 87 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CCDC50Q8IVM0 306 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CDKL3Q8IVW4 592 aaPredicted RBP3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 NAXDQ8IW45 347 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SLC25A45Q8N413 288 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 RYBPQ8N488 228 aaPredicted RBP3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 TTC30BQ8N4P2 665 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CCNYQ8ND76 341 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 PPHLN1Q8NEY8 458 aaKnown RBP3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 OR5R1Q8NH85 324 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CXorf40AQ8TE69 158 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 GANCQ8TET4 914 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SKA1Q96BD8 255 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ZNF524Q96C55 264 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 RHBDF1Q96CC6 855 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 C17orf77Q96MU5 243 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ZNF583Q96ND8 569 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 ALS2CR12Q96Q35 445 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SMIM14Q96QK8 99 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 LITAFQ99732 161 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 MLPHQ9BV36 600 aaPredicted RBP3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 LZTFL1Q9NQ48 299 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 GDF3Q9NR23 364 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SLC6A13Q9NSD5 602 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SMOXQ9NWM0 555 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 FAM118AQ9NWS6 357 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 AASSQ9UDR5 926 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 FAM153AQ9UHL3 310 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CHKBQ9Y259 395 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 SLC17A4Q9Y2C5 497 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 JRKLQ9Y4A0 524 aa3.8□□□□□ -1.8
SOX9-AS1-214ENST00000540802 CSNK1G3Q9Y6M4 447 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms