RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 PRAMEF2O60811 474 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 ITGA10O75578 1167 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 OR2J2O76002 312 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 WDPCPO95876 746 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 CBX7O95931 251 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 LSP1P33241 339 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 MC3RP41968 323 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 GNGT1P63211 74 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 IRX1P78414 480 aaPredicted RBP14.37□□□□□ -0.11
DDB1-218ENST00000540784 PIGGQ5H8A4 983 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 CGB2Q6NT52 195 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 C16orf47Q6ZP98 133 aaPredicted RBP14.37□□□□□ -0.11
DDB1-218ENST00000540784 TEX19Q8NA77 164 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 SIMC1Q8NDZ2 872 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 C16orf52Q8NHV5 167 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 TP53INP1Q96A56 240 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 GAL3ST4Q96RP7 486 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 UTP23Q9BRU9 249 aaKnown RBP14.37□□□□□ -0.11
DDB1-218ENST00000540784 WWTR1Q9GZV5 400 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 ANKRA2Q9H9E1 313 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 DDX18Q9NVP1 670 aaKnown RBP14.37□□□□□ -0.11
DDB1-218ENST00000540784 TAS2R9Q9NYW1 312 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 C19orf53Q9UNZ5 99 aaPredicted RBP14.37□□□□□ -0.11
DDB1-218ENST00000540784 KMT2BQ9UMN6 2715 aaPredicted RBP14.37□□□□□ -0.11
DDB1-218ENST00000540784 UPK1AO00322 258 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 RNASET2O00584 256 aaKnown RBP14.36□□□□□ -0.11
DDB1-218ENST00000540784 C6orf47O95873 294 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 F10P00742 488 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 IL6P05231 212 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 IFI6P09912 130 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 GPX3P22352 226 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 IL12AP29459 219 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 CD96P40200 585 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 CASRP41180 1078 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 EMDP50402 254 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 CDK9P50750 372 aaKnown RBP14.36□□□□□ -0.11
DDB1-218ENST00000540784 ATP4BP51164 291 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 SSR4P51571 173 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 DGKQP52824 942 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 SEC24CP53992 1094 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 PRKAG1P54619 331 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 WNT3P56703 355 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 OC90Q02509 493 aaPredicted RBP14.36□□□□□ -0.11
DDB1-218ENST00000540784 DUSP8Q13202 625 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 EBPQ15125 230 aaKnown RBP14.36□□□□□ -0.11
DDB1-218ENST00000540784 FAM174BQ3ZCQ3 159 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 SPANXN4Q5MJ08 99 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 FHL5Q5TD97 284 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 PAOXQ6QHF9 649 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 CPLX4Q7Z7G2 160 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 OR2L13Q8N349 312 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 TMEM156Q8N614 296 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 CATSPER1Q8NEC5 780 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 OR52E6Q96RD3 313 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 MFRPQ9BY79 579 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 RNF32Q9H0A6 362 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDB1-218ENST00000540784 KLHL14Q9P2G3 628 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 SNX8Q9Y5X2 465 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 CROCCQ5TZA2 2017 aa14.36□□□□□ -0.11
DDB1-218ENST00000540784 NBEAQ8NFP9 2946 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 FAM234BA2RU67 622 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 OR5H15A6NDH6 313 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 C9JVG2 144 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 EMC8O43402 210 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 COQ9O75208 318 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 CPSF4O95639 269 aaKnown RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 PGRP06401 933 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 ABCB1P08183 1280 aaPredicted RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 DRD5P21918 477 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 TRHRP34981 398 aaPredicted RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 PPICP45877 212 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 MRPL19P49406 292 aaKnown RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 CYB561P49447 251 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 ST13P50502 369 aaKnown RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 HLCSP50747 726 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 NR0B1P51843 470 aaKnown RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 POLR2JP52435 117 aaKnown RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 DCAF7P61962 342 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 PHC1P78364 1004 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 TUBA3CQ13748 450 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 SQLEQ14534 574 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 TUBA3EQ6PEY2 450 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 OPN5Q6U736 354 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 PTRH1Q86Y79 214 aaKnown RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 TAGAPQ8N103 731 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 SLC15A4Q8N697 577 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 HORMAD2Q8N7B1 307 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 RBMXL3Q8N7X1 1067 aaKnown RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 SLC22A8Q8TCC7 542 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 ASB15Q8WXK1 588 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 ADIPOR1Q96A54 375 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 BBC3Q96PG8 261 aaPredicted RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 RASL10BQ96S79 203 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 ELAC2Q9BQ52 826 aaKnown RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 RABEP2Q9H5N1 569 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 FAM120CQ9NX05 1096 aaKnown RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 ANKRD10Q9NXR5 420 aa14.35□□□□□ -0.11
DDB1-218ENST00000540784 HEMK1Q9Y5R4 338 aaPredicted RBP14.35□□□□□ -0.11
DDB1-218ENST00000540784 COPG1Q9Y678 874 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms