RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 FBXW2Q9UKT8 454 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 PLAGL1Q9UM63 463 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 ASF1AQ9Y294 204 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 YARS2Q9Y2Z4 477 aaKnown RBP11.61□□□□□ -0.55
NPC1-202ENST00000540608 WNT6Q9Y6F9 365 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 ADH1AP07327 375 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 ACRP10323 421 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 NR2F1P10589 423 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 GPR1P46091 355 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 MLC1Q15049 377 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 CLPPQ16740 277 aaPredicted RBP11.61□□□□□ -0.55
NPC1-202ENST00000540608 OR2G6Q5TZ20 316 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 IQCHQ86VS3 1027 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 C17orf64Q86WR6 236 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 XAGE5Q8WWM1 108 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 GATAD2BQ8WXI9 593 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 RNFT2Q96EX2 444 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 ZNF764Q96H86 408 aaPredicted RBP11.61□□□□□ -0.55
NPC1-202ENST00000540608 FYTTD1Q96QD9 318 aaKnown RBP11.61□□□□□ -0.55
NPC1-202ENST00000540608 AIF1LQ9BQI0 150 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 OR51I1Q9H343 314 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 PELI2Q9HAT8 420 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 PLSCR3Q9NRY6 295 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 GPR34Q9UPC5 381 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 SLC9A8Q9Y2E8 581 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 GSTK1Q9Y2Q3 226 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 A0A0B4J293 547 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 CARNS1A5YM72 827 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 SNTNA6NMZ2 147 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 PRODHO43272 600 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 SPINT1O43278 529 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 CSF2P04141 144 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 LINC00271P0C7V0 271 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 CCL5P13501 91 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 GSTM3P21266 225 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 FGF9P31371 208 aaPredicted RBP11.6□□□□□ -0.55
NPC1-202ENST00000540608 UBE3AQ05086 875 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 DMPKQ09013 629 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 QPRTQ15274 297 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 YIF1BQ5BJH7 314 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 LCN1P1Q5VSP4 162 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 RAET1GQ6H3X3 334 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 FAM83HQ6ZRV2 1179 aaPredicted RBP11.6□□□□□ -0.55
NPC1-202ENST00000540608 CAMKK1Q8N5S9 505 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 OR5AR1Q8NGP9 310 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 TMEM163Q8TC26 289 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 UFD1Q92890 307 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 RNF31Q96EP0 1072 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 SOSTQ9BQB4 213 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 OR52A5Q9H2C5 316 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 LHX9Q9NQ69 397 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 HIDE1A8MVS5 230 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 FAM25AB3EWG3 89 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 FAM25CB3EWG5 89 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 FAM25GB3EWG6 89 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 KPNA3O00505 521 aaPredicted RBP11.6□□□□□ -0.55
NPC1-202ENST00000540608 CPN2P22792 545 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 PPP2R1BP30154 601 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 GABRA5P31644 462 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 VASPP50552 380 aaPredicted RBP11.6□□□□□ -0.55
NPC1-202ENST00000540608 METAP1P53582 386 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 PPP3R1P63098 170 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 LSM11P83369 360 aaKnown RBP eCLIP11.6□□□□□ -0.55
NPC1-202ENST00000540608 SLC36A4Q6YBV0 504 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 ZNF765Q7L2R6 523 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 PDZD3Q86UT5 571 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 ATP6V1C2Q8NEY4 427 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 OR52P1PQ8NH57 321 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 ENKURQ8TC29 256 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 C17orf50Q8WW18 174 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 NUS1Q96E22 293 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 RIPOR3Q96MK2 946 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 TM9SF2Q99805 663 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 SPATA5L1Q9BVQ7 753 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 EXOSC1Q9Y3B2 195 aaKnown RBP11.6□□□□□ -0.55
NPC1-202ENST00000540608 MAU2Q9Y6X3 613 aa11.6□□□□□ -0.55
NPC1-202ENST00000540608 NUP210Q8TEM1 1887 aaPredicted RBP11.59□□□□□ -0.55
NPC1-202ENST00000540608 CHD7Q9P2D1 2997 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 TMPRSS11DO60235 418 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 HCN1O60741 890 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 ALX3O95076 343 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 EPPINO95925 133 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 FABP5Q01469 135 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 Q5BKY6 102 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 CD200R1LQ6Q8B3 271 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 MRGPREQ86SM8 312 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 KIF18BQ86Y91 864 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 PLA2G15Q8NCC3 412 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 OR5D16Q8NGK9 328 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 OR6T1Q8NGN1 323 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 UBASH3BQ8TF42 649 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 SLC35G5Q96KT7 338 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 PRRC1Q96M27 445 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 ARHGAP9Q9BRR9 750 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 BCL2L10Q9HD36 194 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 WASH6PQ9NQA3 447 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 TAS2R7Q9NYW3 318 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 TAC3Q9UHF0 121 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 NDRG2Q9UN36 371 aaKnown RBP11.59□□□□□ -0.55
NPC1-202ENST00000540608 HLA-DQB1P01920 261 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms