RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SLC15A4Q8N697 577 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 OR52R1Q8NGF1 315 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 TP53INP1Q96A56 240 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 BBS4Q96RK4 519 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 SH2D2AQ9NP31 389 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 MIEF1Q9NQG6 463 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 GIMAP4Q9NUV9 329 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 ENTPD4Q9Y227 616 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 NPIPA5E9PKD4 350 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 KLRC4-KLRK1H3BQV0 150 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 UNC5CO95185 931 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 FBXO45P0C2W1 286 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 H2AFXP16104 143 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 GRK2P25098 689 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 EMDP50402 254 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 SLC18A1P54219 525 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 ALDH6A1Q02252 535 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 BST1Q10588 318 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 STX3Q13277 289 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 UBAP2LQ14157 1087 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 ELOAQ14241 798 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 C6orf136Q5SQH8 315 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 FHL5Q5TD97 284 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 HOMEZQ8IX15 550 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 SAMD14Q8IZD0 417 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 ZFP62Q8NB50 900 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 GOLM1Q8NBJ4 401 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 FAM98AQ8NCA5 519 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 OR7G2Q8NG99 324 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 SPACA9Q96E40 222 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 PPP3R2Q96LZ3 170 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 ITPAQ9BY32 194 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 NXF5Q9H1B4 397 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 GLIPR2Q9H4G4 154 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 NPIPA1Q9UND3 350 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 OSGIN2Q9Y236 505 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 TMED5Q9Y3A6 229 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 RAP2CQ9Y3L5 183 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 ZGRF1Q86YA3 2104 aa16.87■□□□□ 0.29
SNRPA1-203ENST00000540017 RNF224P0DH78 156 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 MPIP34949 423 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 PDCD2Q16342 344 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 NNATQ16517 81 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 AGBL2Q5U5Z8 902 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 HLA-DQA1Q5Y7H0 255 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 GFRALQ6UXV0 394 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 PRR22Q8IZ63 422 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 FAM9CQ8IZT9 166 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 FAM26EQ8N5C1 309 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 OR2M7Q8NG81 312 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 OR10G3Q8NGC4 313 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 PAQR8Q8TEZ7 354 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 SGCZQ96LD1 299 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 PPP1R36Q96LQ0 422 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 C1orf50Q9BV19 199 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 PROK2Q9HC23 129 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 SEC14L3Q9UDX4 400 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 HAO1Q9UJM8 370 aa16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 CHCHD2Q9Y6H1 151 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-203ENST00000540017 ZNHIT1O43257 154 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 ZNF24P17028 368 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 CNR1P21554 472 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 PIGAP37287 484 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 DNASE1L1P49184 302 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 RPL14P50914 215 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 NCBP2P52298 156 aaKnown RBP eCLIP16.85■□□□□ 0.291e-6■□□□□ 10.4
SNRPA1-203ENST00000540017 FBXW4P57775 412 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 PDE7AQ13946 482 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 NTRK2Q16620 822 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 ATP6AP1LQ52LC2 224 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 TAGAPQ8N103 731 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 LIX1Q8N485 282 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 FAM13CQ8NE31 585 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 C17orf47Q8NEP4 570 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 OR5M3Q8NGP4 307 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 NUDT8Q8WV74 236 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 CIDECQ96AQ7 238 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 TUBGCP3Q96CW5 907 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 GPR137Q96N19 417 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 AMDHD1Q96NU7 426 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 REEP4Q9H6H4 257 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 SACM1LQ9NTJ5 587 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 PNPOQ9NVS9 261 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 ERRFI1Q9UJM3 462 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 NPFFR2Q9Y5X5 522 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 POLEQ07864 2286 aa16.85■□□□□ 0.29
SNRPA1-203ENST00000540017 HIVEP3Q5T1R4 2406 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 ASNA1O43681 348 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 PLOD3O60568 738 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 TBX19O60806 448 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 ABCD3P28288 659 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 MC3RP41968 323 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 HSF1Q00613 529 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 FOXO1Q12778 655 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 TTMPQ5BVD1 217 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 PRAMEF20Q5VT98 475 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 IL23RQ5VWK5 629 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 SLC22A10Q63ZE4 541 aa16.84■□□□□ 0.29
SNRPA1-203ENST00000540017 DESI1Q6ICB0 168 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms