RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ZNF160Q9HCG1 818 aa14.38□□□□□ -0.11
DDB1-216ENST00000539739 GALNT8Q9NY28 637 aa14.38□□□□□ -0.11
DDB1-216ENST00000539739 PTGFRNQ9P2B2 879 aa14.38□□□□□ -0.11
DDB1-216ENST00000539739 LEF1Q9UJU2 399 aaPredicted RBP14.38□□□□□ -0.11
DDB1-216ENST00000539739 ERVK-19Q9WJR5 959 aa14.38□□□□□ -0.11
DDB1-216ENST00000539739 NDUFAF1Q9Y375 327 aa14.38□□□□□ -0.11
DDB1-216ENST00000539739 LRRC42Q9Y546 428 aa14.38□□□□□ -0.11
DDB1-216ENST00000539739 SNX8Q9Y5X2 465 aa14.38□□□□□ -0.11
DDB1-216ENST00000539739 IGF2RP11717 2491 aa14.38□□□□□ -0.11
DDB1-216ENST00000539739 A0A087WV48 116 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 A0A087WV62 115 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 LOC100653049A0A140TA62 436 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 TAF4O00268 1085 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 RFXANKO14593 260 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 PLOD3O60568 738 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 KRT34O76011 436 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 IFI6P09912 130 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 CT62P0C5K7 136 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 PTGER1P34995 402 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 TMPRSS3P57727 454 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 SLC26A5P58743 744 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 HBA1P69905 142 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 STX5Q13190 355 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 MMEL1Q495T6 779 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 C6orf10Q5SRN2 563 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 PLAG1Q6DJT9 500 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 FAM111BQ6SJ93 734 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 TMEM107Q6UX40 140 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 TRIML2Q8N7C3 387 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 OR7G1Q8NGA0 311 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 OR1N1Q8NGS0 311 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 PSMA8Q8TAA3 256 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 M1APQ8TC57 530 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 DOK4Q8TEW6 326 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 CTHRC1Q96CG8 243 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 CMTM5Q96DZ9 223 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 ELP4Q96EB1 424 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 VMP1Q96GC9 406 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 IMMP1LQ96LU5 166 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 DDX18Q9NVP1 670 aaKnown RBP14.37□□□□□ -0.11
DDB1-216ENST00000539739 PPIEQ9UNP9 301 aaKnown RBP14.37□□□□□ -0.11
DDB1-216ENST00000539739 MAN2B2Q9Y2E5 1009 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 BBIP1A8MTZ0 92 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 DDAH2O95865 285 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 PRDX6P30041 224 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 MC3RP41968 323 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 CDK9P50750 372 aaKnown RBP14.37□□□□□ -0.11
DDB1-216ENST00000539739 CLCN2P51788 898 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 PRR5P85299 388 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 MGAT2Q10469 447 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 FUT7Q11130 342 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 SPDYE7PQ495Y7 208 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 TRMT12Q53H54 448 aaKnown RBP14.37□□□□□ -0.11
DDB1-216ENST00000539739 SNX32Q86XE0 403 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 CLEC1AQ8NC01 280 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 NFAM1Q8NET5 270 aaPredicted RBP14.37□□□□□ -0.11
DDB1-216ENST00000539739 NCLNQ969V3 563 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 MOAP1Q96BY2 351 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 MAGED4Q96JG8 741 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 TMEM165Q9HC07 324 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 ATP13A2Q9NQ11 1180 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 SLC52A3Q9NQ40 469 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 BCAP29Q9UHQ4 241 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 ZNF639Q9UID6 485 aa14.37□□□□□ -0.11
DDB1-216ENST00000539739 CHD8Q9HCK8 2581 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 DPPA5A6NC42 116 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 K7ENP7 123 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 EMC8O43402 210 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 COX4I1P13073 169 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 CD1EP15812 388 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 ITPKBP27987 946 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 SOAT1P35610 550 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 CCT3P49368 545 aaKnown RBP14.36□□□□□ -0.11
DDB1-216ENST00000539739 AIMP2Q13155 320 aaKnown RBP14.36□□□□□ -0.11
DDB1-216ENST00000539739 TLR1Q15399 786 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 DCAF10Q5QP82 559 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 FAM91A1Q658Y4 838 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 BHLHB9Q6PI77 547 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 INO80CQ6PI98 192 aaPredicted RBP14.36□□□□□ -0.11
DDB1-216ENST00000539739 SLC2A7Q6PXP3 512 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 TMEM64Q6YI46 380 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 RNF111Q6ZNA4 994 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 ZNF621Q6ZSS3 439 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 SZRD1Q7Z422 152 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 TREML1Q86YW5 311 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 FITM2Q8N6M3 262 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 OR7G2Q8NG99 324 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 DNAJB8Q8NHS0 232 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 GOT1L1Q8NHS2 421 aaPredicted RBP14.36□□□□□ -0.11
DDB1-216ENST00000539739 ZNF721Q8TF20 911 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 GTF2H4Q92759 462 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 OR10A5Q9H207 317 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 CXorf36Q9H7Y0 433 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 MMP25Q9NPA2 562 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 SIRT3Q9NTG7 399 aaPredicted RBP14.36□□□□□ -0.11
DDB1-216ENST00000539739 VPS4AQ9UN37 437 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 C19orf53Q9UNZ5 99 aaPredicted RBP14.36□□□□□ -0.11
DDB1-216ENST00000539739 CFL2Q9Y281 166 aa14.36□□□□□ -0.11
DDB1-216ENST00000539739 FRYQ5TBA9 3013 aa14.35□□□□□ -0.11
DDB1-216ENST00000539739 ARGFXA6NJG6 315 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms