RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 DCLRE1BQ9H816 532 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 UCK1Q9HA47 277 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TUBG2Q9NRH3 451 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 MRPL22Q9NWU5 206 aaKnown RBP3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 SLC2A8Q9NY64 477 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 HACD3Q9P035 362 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TXNDC16Q9P2K2 825 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 NDRG3Q9UGV2 375 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TBC1D24Q9ULP9 559 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 STAP1Q9ULZ2 295 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 PCDHA7Q9UN72 937 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 ZHX2Q9Y6X8 837 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 TAF1P21675 1872 aa3.53□□□□□ -1.84
AC055720.1-201ENST00000539552 SNED1Q8TER0 1413 aa3.53□□□□□ -1.85
AC055720.1-201ENST00000539552 LAMA1P25391 3075 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 KIF24Q5T7B8 1368 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 OTOGQ6ZRI0 2925 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 AKAP9Q99996 3911 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 CENPVL1A0A0U1RR11 272 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 A0A1W2PPK0 400 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 A0A1W2PPV4 95 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 LRRIQ3A6PVS8 624 aaPredicted RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 H0YIZ8 118 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 M0QZ24 198 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 HAS3O00219 553 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 EEF2KO00418 725 aaKnown RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 INPPL1O15357 1258 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 ZW10O43264 779 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 LPXNO60711 386 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 GMNNO75496 209 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 SYNGR4O95473 234 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 IGHV2-70P01814 119 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 GLAP06280 429 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 CRYGBP07316 175 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 CHRNGP07510 517 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 MMP3P08254 477 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 NUDT17P0C025 328 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 MCF2P10911 925 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 CEACAM1P13688 526 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 AMD1P17707 334 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 UGT1A1P22309 533 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 NR4A1P22736 598 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 DGKAP23743 735 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 ITPKBP27987 946 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 CHATP28329 748 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 GRIA3P42263 894 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 RPL21P46778 160 aaKnown RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 KCNJ4P48050 445 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 CXCR3P49682 368 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 TNFSF10P50591 281 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 BCAP31P51572 246 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 CCNHP51946 323 aaPredicted RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 CCNG1P51959 295 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 P2RX3P56373 397 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 GSCP56915 257 aaPredicted RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 C21orf59P57076 290 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 KRTAP10-6P60371 365 aaPredicted RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 CYP4F2P78329 520 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 BASP1P80723 227 aaKnown RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 HOXA4Q00056 320 aaPredicted RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 SRSF1Q07955 248 aaKnown RBP eCLIP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 TRAP1Q12931 704 aaKnown RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 DMP1Q13316 513 aaPredicted RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 GNA13Q14344 377 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 ELAVL3Q14576 367 aaKnown RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 STK38Q15208 465 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 ANGPT1Q15389 498 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 NPTX1Q15818 432 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 STX1AQ16623 288 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 DCAF4L1Q3SXM0 396 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 AGKQ53H12 422 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 SUSD4Q5VX71 490 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 ALS2CLQ60I27 953 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 NSUN5P2Q63ZY6 315 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 PTRHD1Q6GMV3 140 aaKnown RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 TMEM225Q6GV28 225 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 ZNF770Q6IQ21 691 aaPredicted RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 FAM166AQ6J272 317 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 SLC25A25Q6KCM7 469 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 UGT3A1Q6NUS8 523 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 TPGS1Q6ZTW0 290 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 IL17RELQ6ZVW7 336 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 COPS6Q7L5N1 327 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 VSTM4Q8IW00 320 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 ARHGEF19Q8IW93 802 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 CCDC36Q8IYA8 594 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 RYBPQ8N488 228 aaPredicted RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 PARP16Q8N5Y8 322 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 C9orf106Q8NAJ2 232 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 FNDC5Q8NAU1 212 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 MCPH1Q8NEM0 835 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 NDNFQ8TB73 568 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 ZNF596Q8TC21 504 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 SLC44A1Q8WWI5 657 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 SUSD6Q92537 303 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 WBP2Q969T9 261 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 FUBP1Q96AE4 644 aaKnown RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 REPS1Q96D71 796 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 ELMO2Q96JJ3 720 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 Q96MF0 132 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms