RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 GSTA3Q16772 222 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 ADPRMQ3LIE5 342 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 RFTN2Q52LD8 501 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 ACER2Q5QJU3 275 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 METTL21CQ5VZV1 264 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 SPINK14Q6IE38 97 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 OGFOD2Q6N063 350 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 NOXRED1Q6NXP6 359 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 ABHD17CQ6PCB6 329 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 LIX1Q8N485 282 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 C10orf90Q96M02 699 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 SERINC2Q96SA4 455 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 ZBTB18Q99592 522 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 YIPF2Q9BWQ6 316 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 SORBS1Q9BX66 1292 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 MCM8Q9UJA3 840 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 ADAM29Q9UKF5 820 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 CDC14AQ9UNH5 594 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 PLEKHA6Q9Y2H5 1048 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 NAALAD2Q9Y3Q0 740 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 CCL27Q9Y4X3 112 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 SLC22A7Q9Y694 548 aa11.61□□□□□ -0.55
CLSTN3-208ENST00000538933 MPDZO75970 2070 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 A0A0A6YYC8 382 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 ZNF860A6NHJ4 632 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 FAM90A27PA6NNH2 459 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 A8MUI8 341 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 I3L1I5 382 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 MAN1A2O60476 641 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 HEXAP06865 529 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 INHBBP09529 407 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 PCSK2P16519 638 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 CERS1P27544 350 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 PTGER1P34995 402 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 BSGP35613 385 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 ASMTP46597 345 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 EMP3P54852 163 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 NME5P56597 212 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 AP2B1P63010 937 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 SLAMF1Q13291 335 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 DSG2Q14126 1118 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 FAM53BQ14153 422 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 SQLEQ14534 574 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 OR1C1Q15619 314 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 FCRLBQ6BAA4 426 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 CLEC9AQ6UXN8 241 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 EID3Q8N140 333 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 MIER2Q8N344 545 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 TMEM132CQ8N3T6 1108 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 AMER3Q8N944 861 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 ACOT4Q8N9L9 421 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 CLHC1Q8NHS4 586 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 FAM57AQ8TBR7 257 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 MMABQ96EY8 250 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 TSSK3Q96PN8 268 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 TUBB6Q9BUF5 446 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 POLDIP3Q9BY77 421 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 DPY30Q9C005 99 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 TGIF2Q9GZN2 237 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 WDR41Q9HAD4 459 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 AIG1Q9NVV5 245 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 LYARQ9NX58 379 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 ANKRD10Q9NXR5 420 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 TEKT2Q9UIF3 430 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 FBXW2Q9UKT8 454 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 L3MBTL1Q9Y468 752 aa11.6□□□□□ -0.55
CLSTN3-208ENST00000538933 SGK494L7N484 410 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 PSMD12O00232 456 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 GALR3O60755 368 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 EEDO75530 441 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 NEURL1O76050 574 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 NSA2O95478 260 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 TBX6O95947 436 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 SP1P08047 785 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 G6PDP11413 515 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 BCKDHAP12694 445 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 DDX5P17844 614 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 FBLP22087 321 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 DNASE1P24855 282 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 ATP5A1P25705 553 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 HOXC12P31275 282 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 TLX1P31314 330 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 HPCAL1P37235 193 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 BUD31P41223 144 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 GSTM5P46439 218 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 ALDH9A1P49189 494 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 IRX1P78414 480 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 GALNT18Q6P9A2 607 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 GALNTL5Q7Z4T8 443 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 UBE3DQ7Z6J8 389 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 MTDHQ86UE4 582 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 KRTAP1-3Q8IUG1 177 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 CCDC71Q8IV32 467 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 RPRMLQ8N4K4 120 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 OR9A4Q8NGU2 314 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 MVB12AQ96EY5 273 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 ZNF354BQ96LW1 612 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 LRRC37BQ96QE4 947 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 FAIM2Q9BWQ8 316 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms