RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	MAST4	O15021	2626 aa		11.35	□□□□□ -0.59
CLTCL1-205	ENST00000538828	NIN	Q8N4C6	2090 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828		A0A1B0GVC2	190 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	TTC36	A6NLP5	189 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	MYO1G	B0I1T2	1018 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	PLOD2	O00469	737 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	PRRG2	O14669	202 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	CTIF	O43310	598 aa	Known RBP	11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	SUSD5	O60279	629 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	SNX4	O95219	450 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	CBX7	O95931	251 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	BPGM	P07738	259 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	GPX3	P22352	226 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	SSTR4	P31391	388 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	SOX18	P35713	384 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	FEN1	P39748	380 aa	Known RBP	11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	ASMT	P46597	345 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	ALDH9A1	P49189	494 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	SNTA1	Q13424	505 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	RPS6KA2	Q15349	733 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	ZNF750	Q32MQ0	723 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	UGT3A2	Q3SY77	523 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	ZNF628	Q5EBL2	1059 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	CMPK2	Q5EBM0	449 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	ARL13A	Q5H913	290 aa	Predicted RBP	11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	NOXRED1	Q6NXP6	359 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	XKRX	Q6PP77	449 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828		Q6ZSR9	355 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	FAM109A	Q8N4B1	249 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	MTERF3	Q96E29	417 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	LCOR	Q96JN0	433 aa	Predicted RBP	11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	C12orf65	Q9H3J6	166 aa	Known RBP	11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	LRTM1	Q9HBL6	345 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	TNFRSF12A	Q9NP84	129 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	SLC17A7	Q9P2U7	560 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	BOK	Q9UMX3	212 aa	Predicted RBP	11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828	TRAF6	Q9Y4K3	522 aa		11.34	□□□□□ -0.59
CLTCL1-205	ENST00000538828		A0A1W2PS29	197 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828		E9PLN8	166 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	HCN1	O60741	890 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ABCB7	O75027	752 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SEC22B	O75396	215 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ERLIN1	O75477	346 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	MYZAP	P0CAP1	466 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	DHRS4L1	P0CG22	281 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	CCL3	P10147	92 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PCSK2	P16519	638 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ABCD3	P28288	659 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	EMD	P50402	254 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	NR0B1	P51843	470 aa	Known RBP	11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SLC18A1	P54219	525 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PPIA	P62937	165 aa	Known RBP	11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	C2orf80	Q0P641	193 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ART3	Q13508	389 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SMU1	Q2TAY7	513 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	FAM47E	Q6ZV65	393 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	NUP54	Q7Z3B4	507 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	EXOC3L1	Q86VI1	746 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	FAM9C	Q8IZT9	166 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SLC34A3	Q8N130	599 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	NATD1	Q8N6N6	113 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	DTNBP1	Q96EV8	351 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PPP3R2	Q96LZ3	170 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	BTBD9	Q96Q07	612 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	GAL3ST4	Q96RP7	486 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	VKORC1	Q9BQB6	163 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TTTY12	Q9BZ98	90 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	BRINP2	Q9C0B6	783 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ZFP64	Q9NPA5	681 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ACKR4	Q9NPB9	350 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	MIEF1	Q9NQG6	463 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TAS2R9	Q9NYW1	312 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	CNOT11	Q9UKZ1	510 aa	Known RBP	11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	GPR55	Q9Y2T6	319 aa	Predicted RBP	11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	KLF2	Q9Y5W3	355 aa	Predicted RBP	11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828		V9GYY5	206 aa	Predicted RBP	11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	EXPH5	Q8NEV8	1989 aa		11.33	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TRGV8	A0A0C4DH27	118 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	FRG2C	A6NGY1	282 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	CCL21	O00585	134 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	LSM1	O15116	133 aa	Known RBP	11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	HS6ST1	O60243	411 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	COQ9	O75208	318 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SPAG7	O75391	227 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PPM1B	O75688	479 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ZWINT	O95229	277 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	HOXD4	P09016	255 aa	Predicted RBP	11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	RNF224	P0DH78	156 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ABO	P16442	354 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	GRK2	P25098	689 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	MAPK1	P28482	360 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PTGS2	P35354	604 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	RPL3	P39023	403 aa	Known RBP	11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ST13	P50502	369 aa	Known RBP	11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	GPR85	P60893	370 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PLGLB1	Q02325	96 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms