RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TGIF2Q9GZN2 237 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 RAD21L1Q9H4I0 556 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 ALG2Q9H553 416 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 ADAP2Q9NPF8 381 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 WDR70Q9NW82 654 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 MAT2BQ9NZL9 334 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 BCAP29Q9UHQ4 241 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 C3orf18Q9UK00 162 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 ERVK-11Q9UQG0 969 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 PTRH2Q9Y3E5 179 aaKnown RBP13.22□□□□□ -0.29
CD4-208ENST00000538827 PCDHGA8Q9Y5G5 932 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 ZNF462Q96JM2 2506 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 SPTA1P02549 2419 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 MYO18BQ8IUG5 2567 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 A0A087WV48 116 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 IGKV3D-11A0A0A0MRZ8 115 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 VSTM2BA6NLU5 285 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 FAM220BPB1ANY3 271 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 C17orf105B2RV13 164 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 IDSB3KWA1 339 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 ATXN7O15265 892 aaPredicted RBP13.21□□□□□ -0.29
CD4-208ENST00000538827 DYRK3O43781 588 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 ALOX12BO75342 701 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 C1QL1O75973 258 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 SLITRK5O94991 958 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 PRB1P04280 392 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 FOLR3P41439 243 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 KHKP50053 298 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 EEFSECP57772 596 aaKnown RBP13.21□□□□□ -0.29
CD4-208ENST00000538827 OR4D2P58180 307 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 ZNF267Q14586 743 aaPredicted RBP13.21□□□□□ -0.29
CD4-208ENST00000538827 EXOSC7Q15024 291 aaKnown RBP13.21□□□□□ -0.29
CD4-208ENST00000538827 PRICKLE4Q2TBC4 344 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 PIGGQ5H8A4 983 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 SAXO2Q658L1 398 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 MRPL14Q6P1L8 145 aaKnown RBP13.21□□□□□ -0.29
CD4-208ENST00000538827 BHLHB9Q6PI77 547 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 TIPARPQ7Z3E1 657 aaKnown RBP13.21□□□□□ -0.29
CD4-208ENST00000538827 VWA5B2Q8N398 1253 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 FBXW8Q8N3Y1 598 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 OR52N2Q8NGI0 321 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 ZNF675Q8TD23 568 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 RIT1Q92963 219 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 NEURL3Q96EH8 262 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 OTUB1Q96FW1 271 aaPredicted RBP13.21□□□□□ -0.29
CD4-208ENST00000538827 MS4A4EQ96PG1 132 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 SPSB2Q99619 263 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 YIPF4Q9BSR8 244 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 SLC26A1Q9H2B4 701 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 MMADHCQ9H3L0 296 aaPredicted RBP13.21□□□□□ -0.29
CD4-208ENST00000538827 WDR54Q9H977 334 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 PTGFRNQ9P2B2 879 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 PADI1Q9ULC6 663 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 USP22Q9UPT9 525 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 ERVK-19Q9WJR5 959 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 PADI2Q9Y2J8 665 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 AP3M1Q9Y2T2 418 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 CLDN16Q9Y5I7 305 aa13.21□□□□□ -0.29
CD4-208ENST00000538827 TCRBV16S1A1N1A0A5B0 115 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 PRORSD1PA6NEY8 169 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 H0YHG0 523 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 GSTA4O15217 222 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 BRINP1O60477 761 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 DNAJA2O60884 412 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 COQ9O75208 318 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 STAMBPO95630 424 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 RECKO95980 971 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 ETFAP13804 333 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 TCN2P20062 427 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 ME2P23368 584 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 MSX2P35548 267 aaPredicted RBP13.2□□□□□ -0.3
CD4-208ENST00000538827 DSTNP60981 165 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 EEF1A2Q05639 463 aaKnown RBP13.2□□□□□ -0.3
CD4-208ENST00000538827 LASP1Q14847 261 aaKnown RBP13.2□□□□□ -0.3
CD4-208ENST00000538827 TRMT12Q53H54 448 aaKnown RBP13.2□□□□□ -0.3
CD4-208ENST00000538827 COX20Q5RI15 118 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 GCNT6Q5T4J0 391 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 FAM69BQ5VUD6 431 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 C1orf146Q5VVC0 180 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 CPZQ66K79 652 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 C6orf120Q7Z4R8 191 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 LURAP1LQ8IV03 231 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 NLGN4XQ8N0W4 816 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 NLGN4YQ8NFZ3 816 aaPredicted RBP13.2□□□□□ -0.3
CD4-208ENST00000538827 OR2T12Q8NG77 320 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 OR52R1Q8NGF1 315 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 PSMA8Q8TAA3 256 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 OR51I1Q9H343 314 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 EPS8L2Q9H6S3 715 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 CXorf21Q9HAI6 301 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 C19orf25Q9UFG5 118 aaPredicted RBP13.2□□□□□ -0.3
CD4-208ENST00000538827 SLC7A8Q9UHI5 535 aa13.2□□□□□ -0.3
CD4-208ENST00000538827 RRP15Q9Y3B9 282 aaKnown RBP13.2□□□□□ -0.3
CD4-208ENST00000538827 IGHV3-20A0A0C4DH32 117 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 SYNDIG1LA6NDD5 238 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 STMND1H3BQB6 276 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 J3QKU1 62 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 UPK1AO00322 258 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 PLOD2O00469 737 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 NME6O75414 186 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms