RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ZNF81P51508 661 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 HTRA3P83110 453 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 NDUFA9Q16795 377 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 LGALSLQ3ZCW2 172 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 GARNL3Q5VVW2 1013 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 RBP7Q96R05 134 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 TMED9Q9BVK6 235 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 OR51J1Q9H342 316 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 CLCA2Q9UQC9 943 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 CACNG2Q9Y698 323 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 TRAV6A0A075B6T7 132 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 NPIPB15A6NHN6 443 aaPredicted RBP17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 SLC38A8A6NNN8 435 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 GABRPO00591 440 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 SOCS5O75159 536 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 ELNP15502 786 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 GKP32189 559 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 BMP8BP34820 402 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 MTNR1AP48039 350 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 NAE1Q13564 534 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 GLB1LQ6UWU2 654 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 CXCL17Q6UXB2 119 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 OTOP2Q7RTS6 562 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 BMP8AQ7Z5Y6 402 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 OR6C4Q8NGE1 309 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 SMG7Q92540 1137 aaKnown RBP17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 RBPMSQ93062 196 aaKnown RBP17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 MED8Q96G25 268 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 OR4K3Q96R72 315 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 TBC1D17Q9HA65 648 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 UCKL1Q9NWZ5 548 aa17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 HELZP42694 1942 aaKnown RBP17.58■□□□□ 0.41
SFSWAP-207ENST00000538548 A0A1B0GVI7 797 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 A0A1W2PRB8 838 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 CACNB4O00305 520 aaPredicted RBP17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 MTRF1O75570 445 aaKnown RBP17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 VNN2O95498 520 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 CXCL3P19876 107 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 SOX18P35713 384 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 THPOP40225 353 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 CDK5Q00535 292 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 C2orf80Q0P641 193 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 NTRK2Q16620 822 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 KIAA1324Q6UXG2 1013 aaKnown RBP17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 RTL4Q6ZR62 310 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 PRICKLE2Q7Z3G6 844 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 COMMD6Q7Z4G1 85 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 SLC38A5Q8WUX1 472 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 PCNPQ8WW12 178 aaKnown RBP17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 RADILQ96JH8 1075 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 GKN1Q9NS71 199 aa17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 FBXO9Q9UK97 447 aaPredicted RBP17.58■□□□□ 0.4
SFSWAP-207ENST00000538548 LALBAP00709 142 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 GBAP04062 536 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 OR12D1P0DN82 309 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 CD79BP40259 229 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 FLT3LGP49771 235 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 GBX2P52951 348 aaPredicted RBP17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 MINDY4Q4G0A6 757 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 AGTRAPQ6RW13 159 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 CRTC1Q6UUV9 634 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 ARSKQ6UWY0 536 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 SLC36A4Q6YBV0 504 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 TMEM91Q6ZNR0 172 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 RASGRP3Q8IV61 690 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 OR5M3Q8NGP4 307 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 PMEPA1Q969W9 287 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 ASIC4Q96FT7 647 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 LYSMD1Q96S90 227 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 NLNQ9BYT8 704 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 GSX2Q9BZM3 304 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 DPAGT1Q9H3H5 408 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 BRD9Q9H8M2 597 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 CYSLTR2Q9NS75 346 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 LYARQ9NX58 379 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 FBXW2Q9UKT8 454 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 OR51B4Q9Y5P0 310 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 KPNA5O15131 536 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 COCHO43405 550 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 BCHEP06276 602 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 MAPK8P45983 427 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 SMSP52788 366 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 EPHA5P54756 1037 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 DUSP4Q13115 394 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 GPR17Q13304 367 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 LRRC28Q86X40 367 aaPredicted RBP17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 RBM45Q8IUH3 476 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 OR8K5Q8NH50 307 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 RAET1EQ8TD07 263 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 RSPO3Q9BXY4 272 aaPredicted RBP17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 ENAMQ9NRM1 1142 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 IMP3Q9NV31 184 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 RABL2AQ9UBK7 228 aaPredicted RBP17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 MAB21L2Q9Y586 359 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 NUBP2Q9Y5Y2 271 aa17.57■□□□□ 0.4
SFSWAP-207ENST00000538548 PRRG1O14668 218 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 TFPIP10646 304 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 UQCRC2P22695 453 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 AHCYP23526 432 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 SEMG2Q02383 582 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms