RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PDSS2Q86YH6 399 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 DNTTIP1Q9H147 329 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 MTHFD2LQ9H903 347 aaPredicted RBP16.01■□□□□ 0.15
SCARB1-205ENST00000538291 H3BQ06 376 aaPredicted RBP16.01■□□□□ 0.15
SCARB1-205ENST00000538291 AMY2BP19961 511 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 CFL1P23528 166 aaKnown RBP16.01■□□□□ 0.15
SCARB1-205ENST00000538291 UQCRC1P31930 480 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 SLC26A5P58743 744 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 C3P1Q6ZMU1 363 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 UEVLDQ8IX04 471 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 TEX26Q8N6G2 289 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 STOML3Q8TAV4 291 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 SERINC2Q96SA4 455 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 MAP3K3Q99759 626 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 KCNK12Q9HB15 430 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 C2orf42Q9NWW7 574 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 SLITRK5O94991 958 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 ZNF43P17038 809 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 BTBD16Q32M84 506 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 LIPKQ5VXJ0 399 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 OR5J2Q8NH18 312 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 ZNF431Q8TF32 576 aaPredicted RBP16.01■□□□□ 0.15
SCARB1-205ENST00000538291 SLC25A44Q96H78 314 aaPredicted RBP16.01■□□□□ 0.15
SCARB1-205ENST00000538291 SLC45A3Q96JT2 553 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 SLC6A7Q99884 636 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 LATO43561 262 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 SFTPBP07988 381 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 GRIN2CQ14957 1233 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 EEF1A1P5Q5VTE0 462 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 LHFPL3Q86UP9 236 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 SLC22A16Q86VW1 577 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 OR6C4Q8NGE1 309 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 C16orf78Q8WTQ4 265 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 TMEM40Q8WWA1 233 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 ECHDC3Q96DC8 303 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 ACTRT3Q9BYD9 372 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 PIGBOS1A0A0B4J2F0 54 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 ZNF850A8MQ14 1090 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 APOL3O95236 402 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 CKMT1AP12532 417 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 CLCN2P51788 898 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 RBM12BQ8IXT5 1001 aaKnown RBP16■□□□□ 0.15
SCARB1-205ENST00000538291 WDR20Q8TBZ3 569 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 SLC12A9Q9BXP2 914 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 POTEKPQ9BYX7 375 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 KCNN3Q9UGI6 736 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 LCN1P31025 176 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 NUDT1P36639 197 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 SLC18B1Q6NT16 456 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 CYS1Q717R9 158 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 TRMT10AQ8TBZ6 339 aaKnown RBP16■□□□□ 0.15
SCARB1-205ENST00000538291 DPH2Q9BQC3 489 aaPredicted RBP16■□□□□ 0.15
SCARB1-205ENST00000538291 LINC00597Q9H2U6 94 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 SMCO3A2RU48 225 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 E7ESA3 106 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 BRINP1O60477 761 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 IFNA2P01563 188 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 PABPC4LP0CB38 370 aaKnown RBP16■□□□□ 0.15
SCARB1-205ENST00000538291 ATXN7L3Q14CW9 347 aaPredicted RBP16■□□□□ 0.15
SCARB1-205ENST00000538291 NDUFAF5Q5TEU4 345 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 NLGN4YQ8NFZ3 816 aaPredicted RBP16■□□□□ 0.15
SCARB1-205ENST00000538291 FBXL8Q96CD0 374 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 MUS81Q96NY9 551 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 APOOQ9BUR5 198 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 BEX2Q9BXY8 128 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 BEX1Q9HBH7 125 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 ACSL6Q9UKU0 697 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 IFNGR1P15260 489 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 CLLU1OSQ5K130 101 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 FAM205BPQ63HN1 556 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 BAIAP2L2Q6UXY1 529 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 ACBD7Q8N6N7 88 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 COPZ2Q9P299 210 aa16■□□□□ 0.15
SCARB1-205ENST00000538291 GPR4P46093 362 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 OR4D1Q15615 310 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 TMIEQ8NEW7 156 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 OR52B6Q8NGF0 335 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 OR52E2Q8NGJ4 325 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 SUN5Q8TC36 379 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 ABCG2Q9UNQ0 655 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 SIGLEC1Q9BZZ2 1709 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 IGKV6D-21A0A0A0MT36 114 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 TMX2-CTNND1H3BSU7 103 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 GNAO1P09471 354 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 GRPRP30550 384 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 TNFRSF4P43489 277 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 CXCL12P48061 93 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 LYSMD4Q5XG99 296 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 Q6ZSR6 202 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 FAM46BQ96A09 425 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 TMEM19Q96HH6 336 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 RNF215Q9Y6U7 377 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 SLC16A8O95907 504 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 IFNA5P01569 189 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 UGT8Q16880 541 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 CTC1Q2NKJ3 1217 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 MORN1Q5T089 497 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 C12orf43Q96C57 262 aaKnown RBP15.99■□□□□ 0.15
SCARB1-205ENST00000538291 SFXN2Q96NB2 322 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 MMP27Q9H306 513 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms