RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 DGCR6Q14129 220 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 SLC9A5Q14940 896 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 TIGD6Q17RP2 521 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 TMEM196Q5HYL7 178 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 DCST1Q5T197 706 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 MEDAGQ5VYS4 303 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 SLC48A1Q6P1K1 146 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 C16orf87Q6PH81 154 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 ZBTB46Q86UZ6 589 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 CACUL1Q86Y37 369 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 SLC44A2Q8IWA5 706 aaPredicted RBP8.71□□□□□ -1.02
DDB1-211ENST00000538280 TAGAPQ8N103 731 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 ZNF687Q8N1G0 1237 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 LINC00471Q8N535 108 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 IL17RCQ8NAC3 791 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 MINDY2Q8NBR6 621 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 ZBTB44Q8NCP5 570 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 OR56A1Q8NGH5 318 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 NT5CQ8TCD5 201 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 UTP15Q8TED0 518 aaKnown RBP8.71□□□□□ -1.02
DDB1-211ENST00000538280 NR4A3Q92570 626 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 KLK6Q92876 244 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 RPL3LQ92901 407 aaKnown RBP8.71□□□□□ -1.02
DDB1-211ENST00000538280 FGF11Q92914 225 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 GTPBP3Q969Y2 492 aaKnown RBP8.71□□□□□ -1.02
DDB1-211ENST00000538280 ZNF681Q96N22 645 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 OR2M4Q96R27 311 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 ARHGDIGQ99819 225 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 TREX2Q9BQ50 279 aaPredicted RBP8.71□□□□□ -1.02
DDB1-211ENST00000538280 C17orf62Q9BQA9 187 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 WFDC6Q9BQY6 131 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 MROQ9BYG7 248 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 OSGEPL1Q9H4B0 414 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 SYNPO2LQ9H987 977 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 PRMT8Q9NR22 394 aaPredicted RBP8.71□□□□□ -1.02
DDB1-211ENST00000538280 SEMA3GQ9NS98 782 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 ZCCHC3Q9NUD5 404 aaKnown RBP8.71□□□□□ -1.02
DDB1-211ENST00000538280 LYARQ9NX58 379 aaKnown RBP8.71□□□□□ -1.02
DDB1-211ENST00000538280 IMPAD1Q9NX62 359 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 FBXL12Q9NXK8 326 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 GIN1Q9NXP7 522 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 SPHK1Q9NYA1 384 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 GPR83Q9NYM4 423 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 CCDC59Q9P031 241 aaKnown RBP8.71□□□□□ -1.02
DDB1-211ENST00000538280 SCHIP1Q9P0W5 487 aaPredicted RBP8.71□□□□□ -1.02
DDB1-211ENST00000538280 RHCGQ9UBD6 479 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 APOBEC3BQ9UH17 382 aaKnown RBP8.71□□□□□ -1.02
DDB1-211ENST00000538280 PCOLCE2Q9UKZ9 415 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 TMCC3Q9ULS5 477 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 SCML1Q9UN30 329 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 SLC6A14Q9UN76 642 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 KLK4Q9Y5K2 254 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 HEBP2Q9Y5Z4 205 aa8.71□□□□□ -1.02
DDB1-211ENST00000538280 LRP4O75096 1905 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 A0A0G2JN53 185 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 A0A0G2JPF8 293 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 A0A1W2PQF6 199 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 PRSS38A1L453 326 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 HNRNPCL2B2RXH8 293 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 HNRNPCL3B7ZW38 293 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 SYT5O00445 386 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 CASC3O15234 703 aaKnown RBP8.7□□□□□ -1.02
DDB1-211ENST00000538280 ERI3O43414 337 aaKnown RBP8.7□□□□□ -1.02
DDB1-211ENST00000538280 LATO43561 262 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 ASNA1O43681 348 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 AIREO43918 545 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 LGI1O95970 557 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 DNTTP04053 509 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 RPLP0P05388 317 aaKnown RBP8.7□□□□□ -1.02
DDB1-211ENST00000538280 FHP07954 510 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 CHRM4P08173 479 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 HNRNPCL4P0DMR1 293 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 SMIM10L1P0DMW3 83 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 HOXB3P14651 431 aaPredicted RBP8.7□□□□□ -1.02
DDB1-211ENST00000538280 GADD45AP24522 165 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 NDUFS1P28331 727 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 ALDH4A1P30038 563 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 NTSR1P30989 418 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 GPC1P35052 558 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 TIE1P35590 1138 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 SOX9P48436 509 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 MAN2A2P49641 1150 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 NCBP2P52298 156 aaKnown RBP eCLIP8.7□□□□□ -1.02
DDB1-211ENST00000538280 CRISP3P54108 245 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 LSM3P62310 102 aaKnown RBP8.7□□□□□ -1.02
DDB1-211ENST00000538280 PPP2CBP62714 309 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 PPP2CAP67775 309 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 OLR1P78380 273 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 RHAGQ02094 409 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 DMWDQ09019 674 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 ST3GAL4Q11206 333 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 COX10Q12887 443 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 SLAMF1Q13291 335 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 TP53BP2Q13625 1128 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 GNA13Q14344 377 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 OXA1LQ15070 435 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 OCLNQ16625 522 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 NDUFA9Q16795 377 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 SYT16Q17RD7 645 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 RGS21Q2M5E4 152 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms