RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ARHGDIAP52565 204 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 INPP5JQ15735 1006 aaPredicted RBP6.77□□□□□ -1.33
MSH6-209ENST00000538136 ATG9BQ674R7 924 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 OR52E8Q6IFG1 317 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 BHLHB9Q6PI77 547 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 ASB18Q6ZVZ8 466 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 TRILQ7L0X0 811 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 TDRPQ86YL5 185 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 FAM9CQ8IZT9 166 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 ZADH2Q8N4Q0 377 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 MFSD9Q8NBP5 474 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 NAXEQ8NCW5 288 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 NSL1Q96IY1 281 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 ITCHQ96J02 903 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 MS4A8Q9BY19 250 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 BRD7Q9NPI1 651 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 MED11Q9P086 117 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 PRODH2Q9UF12 536 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 DAPP1Q9UN19 280 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 CAMK2AQ9UQM7 478 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 CARD8Q9Y2G2 431 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 TMEM184BQ9Y519 407 aaPredicted RBP6.77□□□□□ -1.33
MSH6-209ENST00000538136 C1orf226A1L170 272 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 SDHDO14521 159 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 BIRC5O15392 142 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 CLEC3AO75596 197 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 CREG1O75629 220 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 ZFAND5O76080 213 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 NTN1O95631 604 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 CSTAP01040 98 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 KRT16P08779 473 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 NUDT7P0C024 238 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 ZNF23P17027 643 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 FUT4P22083 530 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 RORAP35398 523 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 CYB561P49447 251 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 SNRPNP63162 240 aaKnown RBP6.77□□□□□ -1.33
MSH6-209ENST00000538136 POU4F3Q15319 338 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 PROX2Q3B8N5 592 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 FAM91A1Q658Y4 838 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 Q6ZSR9 355 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 AMIGO2Q86SJ2 522 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 PAQR7Q86WK9 346 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 SPPL2CQ8IUH8 684 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 SPACA3Q8IXA5 215 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 LINC00471Q8N535 108 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 ATG16L2Q8NAA4 619 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 TADA1Q96BN2 335 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 NSMCE2Q96MF7 247 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 GPR78Q96P69 363 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 SERINC2Q96SA4 455 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 ITPAQ9BY32 194 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 MTCL1Q9Y4B5 1905 aaKnown RBP6.77□□□□□ -1.33
MSH6-209ENST00000538136 HIVEP2P31629 2446 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 FER1L5A0AVI2 2057 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 CCDC160A6NGH7 325 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 CPSF4LA6NMK7 179 aaKnown RBP6.77□□□□□ -1.33
MSH6-209ENST00000538136 C17orf51A8MQB3 221 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 ATP8B1O43520 1251 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 GALR3O60755 368 aaPredicted RBP6.77□□□□□ -1.33
MSH6-209ENST00000538136 ITGA10O75578 1167 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 TIAL1Q01085 375 aaKnown RBP eCLIP6.77□□□□□ -1.33
MSH6-209ENST00000538136 AGAP7PQ5VUJ5 663 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 HPS6Q86YV9 775 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 APOBEC4Q8WW27 367 aaKnown RBP6.77□□□□□ -1.33
MSH6-209ENST00000538136 CDS1Q92903 461 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 TEX37Q96LM6 180 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 FOXN4Q96NZ1 517 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 AGAP4Q96P64 663 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 CCDC90BQ9GZT6 254 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 MS4A12Q9NXJ0 267 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 TAS2R1Q9NYW7 299 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 LEF1Q9UJU2 399 aaPredicted RBP6.77□□□□□ -1.33
MSH6-209ENST00000538136 ZMIZ1Q9ULJ6 1067 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 LHX6Q9UPM6 363 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 ZNF451Q9Y4E5 1061 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 TESMINQ9Y4I5 508 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 SH3PXD2BA1X283 911 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 BLOC1S5-TXNDC5H3BN57 136 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 SNX3O60493 162 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 RPS17P08708 135 aaKnown RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 OCM2P0CE71 109 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 OCMP0CE72 109 aaPredicted RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 ARRB2P32121 409 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 ANXA11P50995 505 aaKnown RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 HK2P52789 917 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 PSME3P61289 254 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 MERTKQ12866 999 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 SLC14A2Q15849 920 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 ZXDCQ2QGD7 858 aaPredicted RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 ZIK1Q3SY52 487 aaPredicted RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 OTPQ5XKR4 325 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 SPATC1Q76KD6 591 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 ARHGAP22Q7Z5H3 698 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 TMEM52Q8NDY8 209 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 OR2T12Q8NG77 320 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 ZFPM2Q8WW38 1151 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 ABHD17AQ96GS6 310 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 RADILQ96JH8 1075 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 LINC00615Q96LM1 132 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms