RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ZNF225Q9UK10 706 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 PCTPQ9UKL6 214 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CA14Q9ULX7 337 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 A0A1W2PRQ8 180 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 TRAPPC13A5PLN9 417 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 MCIDASD6RGH6 385 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 ZNF593O00488 134 aaPredicted RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 SOD1P00441 154 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 MBP02144 154 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 HPXP02790 462 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 HIST1H2ABP04908 130 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 CPN1P15169 458 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 SMPD1P17405 629 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 FDXRP22570 491 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 XPAP23025 273 aaPredicted RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 CRKLP46109 303 aaKnown RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 GEMP55040 296 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 SNRPGP62308 76 aaKnown RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 KCNJ10P78508 379 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 RBBP4Q09028 425 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 TPBGQ13641 420 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 SSPNQ14714 243 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 DCAF15Q66K64 600 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 ZNF613Q6PF04 617 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 HIST3H2AQ7L7L0 130 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 SPNS2Q8IVW8 549 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 CDAN1Q8IWY9 1227 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 LGI4Q8N135 537 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 MEIOBQ8N635 442 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 MDGA1Q8NFP4 955 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 DBF4BQ8NFT6 615 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 OR6K3Q8NGY3 331 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 HIST1H2ACQ93077 130 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 RBM18Q96H35 190 aaKnown RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 MEGF10Q96KG7 1140 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 C7orf34Q96L11 122 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 OSMRQ99650 979 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 NIPSNAP1Q9BPW8 284 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 C2orf88Q9BSF0 95 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 INPP5KQ9BT40 448 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 FSD1LQ9BXM9 530 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 DUSP16Q9BY84 665 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 DEFB129Q9H1M3 183 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 PORCNQ9H237 461 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 CHRDQ9H2X0 955 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 CLMPQ9H6B4 373 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 NPDC1Q9NQX5 325 aaPredicted RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 DUSP22Q9NRW4 184 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 GFOD1Q9NXC2 390 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 TEX10Q9NXF1 929 aaPredicted RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 GDE1Q9NZC3 331 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 GALPQ9UBC7 116 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 TRDV1A0A1B0GX56 115 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 LRIT2A6NDA9 550 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 TMEM200CA6NKL6 621 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 ZAR1LA6NP61 321 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 IMPA2O14732 288 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 SUV39H1O43463 412 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 ICOSLGO75144 302 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 UBBP0CG47 229 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 UBCP0CG48 685 aaKnown RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 PAX6P26367 422 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 HTR2AP28223 471 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 VIPR1P32241 457 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 RNF144AP50876 292 aaPredicted RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 PSMA6P60900 246 aaKnown RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 RPS27AP62979 156 aaKnown RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 UBA52P62987 128 aaKnown RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 RPL38P63173 70 aaKnown RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 BLOC1S1P78537 153 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 MBTPS1Q14703 1052 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC25A52Q3SY17 297 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 AADACL4Q5VUY2 407 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 DOK6Q6PKX4 331 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 C10orf111Q8N326 155 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 FAM71CQ8NEG0 241 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 GNPDA2Q8TDQ7 276 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC35F5Q8WV83 523 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 TMEM143Q96AN5 459 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 EXOSC3Q9NQT5 275 aaKnown RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 BTG4Q9NY30 223 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 RASL12Q9NYN1 266 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 DHCR7Q9UBM7 475 aaKnown RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 ZNF629Q9UEG4 869 aaPredicted RBP8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 FKBPLQ9UIM3 349 aa8.09□□□□□ -1.11
SRGAP1-202ENST00000537556 FPGTO14772 594 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 TGM5O43548 720 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 RGS14O43566 566 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 OR2A4O95047 310 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 SPDEFO95238 335 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 ANXA7P20073 488 aaKnown RBP8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 MST1P26927 711 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 ABCD3P28288 659 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 CNR2P34972 360 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 SULT1E1P49888 294 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 C21orf58P58505 322 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 SNTB2Q13425 540 aaKnown RBP8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 H3F3CQ6NXT2 135 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 TMIGD1Q6UXZ0 262 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 MOB3CQ70IA8 216 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms