RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 PRAMEF2O60811 474 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 CLN5O75503 358 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 PIPP12273 146 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 SPI1P17947 270 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 ZNF528Q3MIS6 628 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 GPRC6AQ5T6X5 926 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 SDHAF4Q5VUM1 108 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 ANGPTL8Q6UXH0 198 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 USP30Q70CQ3 517 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 SKA3Q8IX90 412 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 GINS4Q9BRT9 223 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 DUSP16Q9BY84 665 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 FZD10Q9ULW2 581 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 ZFP37Q9Y6Q3 630 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 LRRC14BA6NHZ5 514 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 ANXA2P2A6NMY6 339 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 WNT9AO14904 365 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 RAD1O60671 282 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 SULT1A3P0DMM9 295 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 SULT1A4P0DMN0 295 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 NFYAP23511 347 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 FPR3P25089 353 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 EIF2S3P41091 472 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 EVX1P49640 407 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 P2RY4P51582 365 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 ATXN1P54253 815 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 TBX4P57082 545 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 PTPRCAPQ14761 206 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 MICBQ29980 383 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 PLA1AQ53H76 456 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 HECTD3Q5T447 861 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 RTL10Q7L3V2 364 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 GPR65Q8IYL9 337 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 PXT1Q8NFP0 134 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 RPLP0P6Q8NHW5 317 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 ING5Q8WYH8 240 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 GTF3AQ92664 365 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 TPD52L3Q96J77 140 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 HSH2DQ96JZ2 352 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 KCNJ15Q99712 375 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 TFB2MQ9H5Q4 396 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 SLCO1C1Q9NYB5 712 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 CACNG4Q9UBN1 327 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 EXTL2Q9UBQ6 330 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 MRTO4Q9UKD2 239 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 MYO7AQ13402 2215 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 SMIM30A4D0T7 59 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 TERTO14746 1132 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 PHYHO14832 338 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 NFATC1O95644 943 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 TFP02787 698 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 OR4Q2P0C623 313 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 HSD17B7P56937 341 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 P2RY14Q15391 338 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 OR7E24Q6IFN5 339 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 ZFP82Q8N141 532 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 KLHL36Q8N4N3 616 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 THAP6Q8TBB0 222 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 METTL6Q8TCB7 284 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 CASD1Q96PB1 797 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 MAPKAP1Q9BPZ7 522 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 KCNH6Q9H252 994 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 KLHL31Q9H511 634 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 ZNF226Q9NYT6 803 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 EFCAB7A8K855 629 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 TXNL1O43396 289 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC28A2O43868 658 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 SIX6O95475 246 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 PAK4O96013 591 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 TCRBP04435 133 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 RAB2AP61019 212 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 SNRPEP62304 92 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 CLLU1OSQ5K130 101 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 NKAIN4Q8IVV8 208 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 C12orf76Q8N812 135 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 TMEM203Q969S6 136 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 DDOQ99489 341 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 WDR77Q9BQA1 342 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 THAP7Q9BT49 309 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 HAPLN2Q9GZV7 340 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 XKR8Q9H6D3 395 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 GLOD4Q9HC38 313 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 PPP4R1LQ9P1A2 415 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 SEC14L3Q9UDX4 400 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 METTL21EPA6NDL7 271 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 GTPBP1O00178 669 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 POP4O95707 220 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 CD1DP15813 335 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 ENGP17813 658 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 S100A11P31949 105 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 MATKP42679 507 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 AVPR1BP47901 424 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 FAM189BP81408 668 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 DSC2Q02487 901 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 C4orf46Q504U0 113 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 TMEM88Q6PEY1 159 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 GRASPQ7Z6J2 395 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 PGBD5Q8N414 524 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 STOX2Q9P2F5 926 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 BTNL2Q9UIR0 455 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms