RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 GPATCH1Q9BRR8 931 aaKnown RBP18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 LRRC1Q9BTT6 524 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CLEC4MQ9H2X3 399 aaPredicted RBP18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ELOVL6Q9H5J4 265 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CRIM1Q9NZV1 1036 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 XPR1Q9UBH6 696 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 MTRF1LQ9UGC7 380 aaKnown RBP18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CFL2Q9Y281 166 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 SLC6A5Q9Y345 797 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 C1orf226A1L170 272 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 GOLGA6L10A6NI86 522 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 KDM4EB2RXH2 506 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 KIF2AO00139 706 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CDH16O75309 829 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 INHBAP08476 426 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 NAGAP17050 411 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 S1PR1P21453 382 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ABCD3P28288 659 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 DEKP35659 375 aaKnown RBP17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 MAGEA12P43365 314 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 WHAMMP3Q1A5X7 153 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TSNAXIP1Q2TAA8 658 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 SGO1Q5FBB7 561 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 NHSL2Q5HYW2 709 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 SLC48A1Q6P1K1 146 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 VWA5B2Q8N398 1253 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 OR4F6Q8NGB9 312 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 SLC44A1Q8WWI5 657 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 RNASE6Q93091 150 aaKnown RBP17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ISL2Q96A47 359 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FOXC2Q99958 501 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 BRINP2Q9C0B6 783 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 NXF5Q9H1B4 397 aaKnown RBP17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 RASSF1Q9NS23 344 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CCM2LQ9NUG4 571 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FOXD3Q9UJU5 478 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 SLC12A4Q9UP95 1085 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CAMK2AQ9UQM7 478 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 DTX4Q9Y2E6 619 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 PCDHA9Q9Y5H5 950 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 EXPH5Q8NEV8 1989 aa17.99■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FAM221AA4D161 298 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 GNB5O14775 395 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 PPM1BO75688 479 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ABCB1P08183 1280 aaPredicted RBP17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 COL6A2P12110 1019 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 BMP7P18075 431 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 MAP4K2Q12851 820 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 PRICKLE4Q2TBC4 344 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FBXL19-AS1Q494R0 122 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FLYWCH1Q4VC44 716 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 EIPR1Q53HC9 387 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 UBAP2Q5T6F2 1119 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 NSUN5P2Q63ZY6 315 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TIGD3Q6B0B8 471 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TAOK1Q7L7X3 1001 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 COMMD6Q7Z4G1 85 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 RELL1Q8IUW5 271 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 OR1J4Q8NGS1 313 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FAM222BQ8WU58 562 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 RMND5BQ96G75 393 aaPredicted RBP17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 UGT2B28Q9BY64 529 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FUT8Q9BYC5 575 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CXXC4Q9H2H0 198 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 METTL7AQ9H8H3 244 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 BCAP29Q9UHQ4 241 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ST6GALNAC2Q9UJ37 374 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CES1P1Q9UKY3 287 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 EDARQ9UNE0 448 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 MED12Q93074 2177 aa17.98■□□□□ 0.47
TNFRSF1B-204ENST00000536782 KIAA1549Q9HCM3 1950 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CD8B2A6NJW9 211 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 A6NNC1 897 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ERAL1O75616 437 aaKnown RBP17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 URI1O94763 535 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 OTCP00480 354 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ATP1B1P05026 303 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CD99P14209 185 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CSNK2A2P19784 350 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 PTPN6P29350 595 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FEN1P39748 380 aaKnown RBP17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 SERPINB9P50453 376 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ZNF136P52737 540 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 MGAT2Q10469 447 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 NNATQ16517 81 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 WIPI1Q5MNZ9 446 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 POMZP3Q6PJE2 187 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FAM111BQ6SJ93 734 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 NUP54Q7Z3B4 507 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CHDHQ8NE62 594 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 GOT1L1Q8NHS2 421 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ABTB1Q969K4 478 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 NTNG2Q96CW9 530 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 WDYHV1Q96HA8 205 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TRIB1Q96RU8 372 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 LIME1Q9H400 295 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FARSBQ9NSD9 589 aaKnown RBP17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 MAT2BQ9NZL9 334 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 PSME2Q9UL46 239 aa17.97■□□□□ 0.47
TNFRSF1B-204ENST00000536782 PDYNP01213 254 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms