RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 YARS2Q9Y2Z4 477 aaKnown RBP12.55□□□□□ -0.4
RPAIN-205ENST00000536255 RP1L1Q8IWN7 2480 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-205ENST00000536255 CROCCQ5TZA2 2017 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 A0A087WV62 115 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 HRKO00198 91 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 UBDO15205 165 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 PLOD3O60568 738 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 ITGA10O75578 1167 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 ZIC2O95409 532 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-205ENST00000536255 IFI6P09912 130 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 CT62P0C5K7 136 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 TROVE2P10155 538 aaKnown RBP eCLIP12.54□□□□□ -0.4
RPAIN-205ENST00000536255 SSTR4P31391 388 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 CD96P40200 585 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 MDH1P40925 334 aaKnown RBP12.54□□□□□ -0.4
RPAIN-205ENST00000536255 ST13P50502 369 aaKnown RBP12.54□□□□□ -0.4
RPAIN-205ENST00000536255 SSR4P51571 173 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 AQP5P55064 265 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 MANFP55145 182 aaKnown RBP12.54□□□□□ -0.4
RPAIN-205ENST00000536255 GUCY1A3Q02108 690 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 OC90Q02509 493 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-205ENST00000536255 SRSF11Q05519 484 aaKnown RBP12.54□□□□□ -0.4
RPAIN-205ENST00000536255 DUSP2Q05923 314 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 MGAT2Q10469 447 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 LTB4RQ15722 352 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 GSTA3Q16772 222 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 MPEG1Q2M385 716 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 LSM12Q3MHD2 195 aaKnown RBP12.54□□□□□ -0.4
RPAIN-205ENST00000536255 ANKRD26P1Q6NSI1 321 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 FAM180AQ6UWF9 173 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 CAMKMTQ7Z624 323 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 RIMKLAQ8IXN7 391 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 C9orf40Q8IXQ3 194 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 TMEM156Q8N614 296 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 KRTCAP2Q8N6L1 136 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 MDS2Q8NDY4 140 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 OR7A2PQ8NGA2 310 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 GRHL3Q8TE85 626 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 DOK4Q8TEW6 326 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 STON2Q8WXE9 905 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 AMDHD1Q96NU7 426 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 GAL3ST4Q96RP7 486 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 ZBTB18Q99592 522 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 CCDC28BQ9BUN5 200 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 BHLHE41Q9C0J9 482 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-205ENST00000536255 GLIPR2Q9H4G4 154 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 CCDC134Q9H6E4 229 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 AIG1Q9NVV5 245 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 ZNF639Q9UID6 485 aa12.54□□□□□ -0.4
RPAIN-205ENST00000536255 SHANK1Q9Y566 2161 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 C2orf92A0A1B0GVN3 265 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 PLOD2O00469 737 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 PRKNO60260 465 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-205ENST00000536255 COQ9O75208 318 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 VIMP08670 466 aaKnown RBP12.53□□□□□ -0.4
RPAIN-205ENST00000536255 ALDOCP09972 364 aaKnown RBP12.53□□□□□ -0.4
RPAIN-205ENST00000536255 S1PR1P21453 382 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 TRHRP34981 398 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-205ENST00000536255 GPC1P35052 558 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 FRKP42685 505 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-205ENST00000536255 CYB561P49447 251 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 IDH3AP50213 366 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 MRPS35P82673 323 aaKnown RBP12.53□□□□□ -0.4
RPAIN-205ENST00000536255 HSPB3Q12988 150 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 MRPL49Q13405 166 aaKnown RBP12.53□□□□□ -0.4
RPAIN-205ENST00000536255 MLC1Q15049 377 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 EBPQ15125 230 aaKnown RBP12.53□□□□□ -0.4
RPAIN-205ENST00000536255 OR1C1Q15619 314 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 PRSS53Q2L4Q9 553 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 TRMT12Q53H54 448 aaKnown RBP12.53□□□□□ -0.4
RPAIN-205ENST00000536255 ZNF385BQ569K4 471 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 ZNF766Q5HY98 468 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 FAM111BQ6SJ93 734 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 GPALPP1Q8IXQ4 340 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 TAGAPQ8N103 731 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 SLC15A4Q8N697 577 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 ZNF615Q8N8J6 731 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 C17orf47Q8NEP4 570 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 VPS37AQ8NEZ2 397 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 OR52R1Q8NGF1 315 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 C16orf52Q8NHV5 167 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 SLC22A8Q8TCC7 542 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 FAR1Q8WVX9 515 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 ASB15Q8WXK1 588 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 KAT2AQ92830 837 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 TP53INP1Q96A56 240 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 CIDECQ96AQ7 238 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-205ENST00000536255 TESCQ96BS2 214 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 COQ8BQ96D53 544 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 SIGLEC12Q96PQ1 595 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 OR52B2Q96RD2 323 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 TAAR6Q96RI8 345 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 DUSP26Q9BV47 211 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 WWTR1Q9GZV5 400 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 NEUROD4Q9HD90 331 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 DDX18Q9NVP1 670 aaKnown RBP12.53□□□□□ -0.4
RPAIN-205ENST00000536255 TAS2R9Q9NYW1 312 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 PCDHGB6Q9Y5F9 930 aa12.53□□□□□ -0.4
RPAIN-205ENST00000536255 FLNCQ14315 2725 aa12.52□□□□□ -0.41
RPAIN-205ENST00000536255 A0A1W2PRB8 838 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms