RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ASF1AQ9Y294 204 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 DNMT3AQ9Y6K1 912 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-203ENST00000535977 TRIM3O75382 744 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-203ENST00000535977 EPCAMP16422 314 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 MC1RQ01726 317 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 AANATQ16613 207 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 GPR153Q6NV75 609 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 SLC9B2Q86UD5 537 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 FAM129CQ86XR2 697 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 PHC2Q8IXK0 858 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 STX19Q8N4C7 294 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 ZNF680Q8NEM1 530 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 ING5Q8WYH8 240 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 CIDECQ96AQ7 238 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-203ENST00000535977 KCNC2Q96PR1 638 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 OR5M11Q96RB7 305 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 UQCC2Q9BRT2 126 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 ASPNQ9BXN1 380 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 WASH6PQ9NQA3 447 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 DEC1Q9P2X7 70 aa16.99■□□□□ 0.31
RAB40C-203ENST00000535977 K7ESM1 405 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 MMP20O60882 483 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 KLHL18O94889 574 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 RHCEP18577 417 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 MADCAM1Q13477 382 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 SLC5A12Q1EHB4 618 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 MPEG1Q2M385 716 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 PLET1Q6UQ28 207 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 TEX261Q6UWH6 196 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 C16orf62Q7Z3J2 963 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 ATCAYQ86WG3 371 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 C12orf40Q86WS4 652 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 LGI4Q8N135 537 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 CXorf40AQ8TE69 158 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 PCNPQ8WW12 178 aaKnown RBP16.98■□□□□ 0.31
RAB40C-203ENST00000535977 FBXW5Q969U6 566 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 TRIM45Q9H8W5 580 aaPredicted RBP16.98■□□□□ 0.31
RAB40C-203ENST00000535977 PCDHGA2Q9Y5H1 932 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 U3KQ87 197 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 ANKDD1BA6NHY2 528 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 WASHC1A8K0Z3 465 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 GBAP04062 536 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 XCR1P46094 333 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 OLR1P78380 273 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 GLYR1Q49A26 553 aaPredicted RBP16.98■□□□□ 0.31
RAB40C-203ENST00000535977 ADAMTSL4Q6UY14 1074 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 ZNF605Q86T29 641 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 C17orf64Q86WR6 236 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 VANGL1Q8TAA9 524 aaPredicted RBP16.98■□□□□ 0.31
RAB40C-203ENST00000535977 OR5P2Q8WZ92 322 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 MAPKAP1Q9BPZ7 522 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 AIF1LQ9BQI0 150 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 SPNS1Q9H2V7 528 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 NT5DC2Q9H857 520 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 MAP4K5Q9Y4K4 846 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 ENPP4Q9Y6X5 453 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 SAP18O00422 153 aaKnown RBP16.98■□□□□ 0.31
RAB40C-203ENST00000535977 MPZL2O60487 215 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 IL3P08700 152 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 ERGP11308 486 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 EVI2BP34910 448 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 CDH12P55289 794 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 MAB21L1Q13394 359 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 RIN1Q13671 783 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 NFE2L1Q14494 772 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.98■□□□□ 0.31
RAB40C-203ENST00000535977 REEP3Q6NUK4 255 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 FAM92BQ6ZTR7 304 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 AMZ2Q86W34 360 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 LINC00518Q8N0U6 118 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 AKAP1Q92667 903 aaKnown RBP eCLIP16.98■□□□□ 0.31
RAB40C-203ENST00000535977 WDFY2Q96P53 400 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 LRRC3BQ96PB8 259 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 FAM129BQ96TA1 746 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 SLC6A16Q9GZN6 736 aa16.98■□□□□ 0.31
RAB40C-203ENST00000535977 EXOSC4Q9NPD3 245 aaKnown RBP16.98■□□□□ 0.31
RAB40C-203ENST00000535977 CEP290O15078 2479 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 LAMA3Q16787 3333 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 PRRT4C9JH25 899 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 C1QTNF3-AMACRE9PGA6 284 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 PDE9AO76083 593 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 OPN1SWP03999 348 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 CBX5P45973 191 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 ST3GAL4Q11206 333 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 DOC2BQ14184 412 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 EXOC3L2Q2M3D2 409 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 TMEM81Q6P7N7 255 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 C11orf96Q7Z7L8 435 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 NXPE3Q969Y0 559 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 ARMC5Q96C12 935 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 PDXPQ96GD0 296 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 ZNF764Q96H86 408 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-203ENST00000535977 COX14Q96I36 57 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 PPA2Q9H2U2 334 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 SNTG1Q9NSN8 517 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 CMAHPQ9Y471 501 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 SLC35F4A4IF30 521 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 CACNB4O00305 520 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-203ENST00000535977 CLEC2LP0C7M8 214 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 GPC1P35052 558 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms