RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 DCAF7P61962 342 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 RPS13P62277 151 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 GAB1Q13480 694 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 CEBPEQ15744 281 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 BCL2A1Q16548 175 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 SHEQ5VZ18 495 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 PRSS57Q6UWY2 283 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 ZNF572Q7Z3I7 529 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 TEX9Q8N6V9 391 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 GBP7Q8N8V2 638 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 FAM13CQ8NE31 585 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 OR4K14Q8NGD5 310 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 WNT2BQ93097 391 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 NAPGQ99747 312 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 TM9SF2Q99805 663 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 SORBS1Q9BX66 1292 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 SHCBP1LQ9BZQ2 653 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 PIGMQ9H3S5 423 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 EXO5Q9H790 373 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 ACTR8Q9H981 624 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 SAYSD1Q9NPB0 183 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 TMCO1Q9UM00 188 aa10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 EXO1Q9UQ84 846 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-206ENST00000535668 C15orf38-AP3S2A0A0A6YYH1 394 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 WASHC1A8K0Z3 465 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 KDM4EB2RXH2 506 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 STX16-NPEPL1H3BU86 382 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 SAP18O00422 153 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 STX16O14662 325 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 SNPHO15079 494 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 PGRMC2O15173 223 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 HCRTR2O43614 444 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 ABCB7O75027 752 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 GUCY1B2O75343 617 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 CLDN9O95484 217 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 C2P06681 752 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 CT62P0C5K7 136 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 PCNAP12004 261 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 CD53P19397 219 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 PIK3R1P27986 724 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 SSTR4P31391 388 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 UQCRC1P31930 480 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 PTGDSP41222 190 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 PPICP45877 212 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 NAGLUP54802 743 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 FBXW4P57775 412 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 TRA2BP62995 288 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 GTF2H2Q13888 395 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 PRICKLE4Q2TBC4 344 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 FRG2Q64ET8 278 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 SLC48A1Q6P1K1 146 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 GTF2H2CQ6P1K8 395 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 CYP20A1Q6UW02 462 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 PAGE2Q7Z2X7 111 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 CMC1Q7Z7K0 106 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 CXorf67Q86X51 503 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 METTL4Q8N3J2 472 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 SPATA4Q8NEY3 305 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 ZNF675Q8TD23 568 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 ABTB1Q969K4 478 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 NXNL1Q96CM4 212 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 ARSGQ96EG1 525 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 DTNBP1Q96EV8 351 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 SLC35A4Q96G79 324 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 C18orf12Q96KH6 178 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 GNRHR2Q96P88 292 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 FRG2BQ96QU4 278 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 GAL3ST4Q96RP7 486 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 G6PC3Q9BUM1 346 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 TRIM31Q9BZY9 425 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 IPPKQ9H8X2 491 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 BRF2Q9HAW0 419 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 TEX10Q9NXF1 929 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 AHSPQ9NZD4 102 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 CLCF1Q9UBD9 225 aa10.22□□□□□ -0.77
CLSTN3-206ENST00000535668 C1orf226A1L170 272 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 OR6C70A6NIJ9 312 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 CLCA1A8K7I4 914 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 FAM171A2A8MVW0 826 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 A8MXE2 369 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 SUPT3HB4E1H0 165 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 SUPT3HO75486 399 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 PRKRAO75569 313 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 ACSL3O95573 720 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 ALDOAP04075 364 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 PORP16435 677 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 TACR1P25103 407 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 MAGEA4P43358 317 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 XKP51811 444 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 TRAF3Q13114 568 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 CPSF6Q16630 551 aaKnown RBP eCLIP10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 PFKFB4Q16877 469 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 HLA-DQA1Q5Y7H0 255 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 WDSUB1Q8N9V3 476 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 FAM83FQ8NEG4 500 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 FBXO25Q8TCJ0 367 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 C11orf24Q96F05 449 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 LCORQ96JN0 433 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 ZNF681Q96N22 645 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 BTBD9Q96Q07 612 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms