RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 TMEFF1Q8IYR6 380 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 PGBD3Q8N328 593 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 Q8N402 240 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 C2orf15Q8WU43 125 aaKnown RBP13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 NXPE3Q969Y0 559 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 ZNF582Q96NG8 517 aaPredicted RBP13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 RAD9AQ99638 391 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 BHLHE41Q9C0J9 482 aaPredicted RBP13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 MAU2Q9Y6X3 613 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 FRYLO94915 3013 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 E9PQ18 207 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 GRM6O15303 877 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 SLC2A2P11168 524 aaPredicted RBP13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 GNSP15586 552 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 DDX5P17844 614 aaKnown RBP13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 TIE1P35590 1138 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 PCBP3P57721 371 aaKnown RBP13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 FCHO2Q0JRZ9 810 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 LTB4RQ15722 352 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 SDE2Q6IQ49 451 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 TMEM107Q6UX40 140 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 RPTNQ6XPR3 784 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 HSDL2Q6YN16 418 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 NOXA1Q86UR1 476 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 MARCH9Q86YJ5 346 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 NANOGP1Q8N7R0 232 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 CREB3L4Q8TEY5 395 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 HMGB4Q8WW32 186 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 UPRTQ96BW1 309 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 CRELD1Q96HD1 420 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 SLC25A19Q9HC21 320 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 TEKT2Q9UIF3 430 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 STOML2Q9UJZ1 356 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 OR1A2Q9Y585 309 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 C12orf71A8MTZ7 269 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 ZNF670-ZNF695F2Z2N8 137 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 SOCS6O14544 535 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 TP53P04637 393 aaPredicted RBP13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 PCCBP05166 539 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 CHRNB1P11230 501 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 SYN1P17600 705 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 POLR2EP19388 210 aaKnown RBP13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 PAX3P23760 479 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 OR10A3P58181 314 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 SCN1BQ07699 218 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 SMUG1Q53HV7 270 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 CEP78Q5JTW2 689 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 PLPP4Q5VZY2 271 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 ZNF783Q6ZMS7 281 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 KLBQ86Z14 1044 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 OR13C5Q8NGS8 318 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 OR8K5Q8NH50 307 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 DNAJA3Q96EY1 480 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 LRRC3BQ96PB8 259 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 LYSMD1Q96S90 227 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 HDHD2Q9H0R4 259 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 SYNPO2LQ9H987 977 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 MAT2BQ9NZL9 334 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 HS3ST2Q9Y278 367 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 C4orf51C9J302 202 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 PDPK1O15530 556 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 GYPBP06028 91 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 VIPR2P41587 438 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 PRAMEF14Q5SWL7 426 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 CCNJQ5T5M9 372 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 IDNKQ5T6J7 187 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 PRAMEF13Q5VWM6 474 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 TUBA3EQ6PEY2 450 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 KRT74Q7RTS7 529 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 LAPTM4BQ86VI4 370 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 TMC8Q8IU68 726 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 IZUMO1Q8IYV9 350 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 FRMD6Q96NE9 622 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 MAPKAP1Q9BPZ7 522 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 MRPL9Q9BYD2 267 aaKnown RBP13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 OR2B2Q9GZK3 357 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 MKRN2Q9H000 416 aaKnown RBP13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 A4GNTQ9UNA3 340 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 CLCA2Q9UQC9 943 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 IRAK3Q9Y616 596 aa13.12□□□□□ -0.31
LPCAT3-203ENST00000535479 GNB5O14775 395 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 REM1O75628 298 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 TOXO94900 526 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 CHRM4P08173 479 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 NCBP2P52298 156 aaKnown RBP eCLIP13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 HCCSP53701 268 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 PNLIPRP1P54315 467 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 SRP54P61011 504 aaKnown RBP13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 ZNF630Q2M218 657 aaPredicted RBP13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 C18orf63Q68DL7 685 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 HIST2H2AA3Q6FI13 130 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 ADGRD2Q7Z7M1 963 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 NKAIN4Q8IVV8 208 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 CRIPAKQ8N1N5 446 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 OR4M2Q8NGB6 313 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 OR51G2Q8NGK0 314 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 OR9A1PQ8NGU1 263 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 PIGKQ92643 395 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 TM4SF18Q96CE8 201 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 TMCO6Q96DC7 493 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms