RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 HMOX2P30519 316 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 DNAJA1P31689 397 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 GMPRP36959 345 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 CDK9P50750 372 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 DIO3P55073 304 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 FUT7Q11130 342 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 HEPACAMQ14CZ8 416 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 WHAMMP3Q1A5X7 153 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 GGTA1PQ4G0N0 100 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 ACSF3Q4G176 576 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 ZDHHC24Q6UX98 284 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 ANGPTL8Q6UXH0 198 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 DGAT2L6Q6ZPD8 337 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 LCORQ96JN0 433 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 ZFP3Q96NJ6 502 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 TM9SF2Q99805 663 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 OSBPL11Q9BXB4 747 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 MRPL1Q9BYD6 325 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 L3MBTL1Q9Y468 752 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 APCP25054 2843 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 EXOC1LA0A1B0GW35 172 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 LRRC3CA6NJW4 275 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 PGRMC2O15173 223 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 TRIM3O75382 744 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 CRCPO75575 148 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 CBR3O75828 277 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 SUPT7LO94864 414 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 GOSR1O95249 250 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 ALDOAP04075 364 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 HSD3B1P14060 373 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 HSD3B2P26439 372 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 ABCD3P28288 659 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 FEN1P39748 380 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 ADH7P40394 386 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 CLK3P49761 638 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 TRA2BP62995 288 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 SNTA1Q13424 505 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 KEAP1Q14145 624 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 RASA2Q15283 850 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 NSUN5P2Q63ZY6 315 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 TIGD3Q6B0B8 471 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 RTL6Q6ICC9 239 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 SLC48A1Q6P1K1 146 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 LYPD8Q6UX82 237 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 TMEM64Q6YI46 380 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 P4HA3Q7Z4N8 544 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 CAMKMTQ7Z624 323 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 IFNEQ86WN2 208 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 PRR22Q8IZ63 422 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 METTL4Q8N3J2 472 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 GBP7Q8N8V2 638 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 OR4F6Q8NGB9 312 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 OR52B6Q8NGF0 335 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 SLC44A1Q8WWI5 657 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 ZNF592Q92610 1267 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 MTBPQ96DY7 904 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 GNRHR2Q96P88 292 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 PAFAH2Q99487 392 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 TIMP4Q99727 224 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 FOXC2Q99958 501 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 GPATCH1Q9BRR8 931 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 SHCBP1LQ9BZQ2 653 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 IQCGQ9H095 443 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 NINJ2Q9NZG7 142 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 VPS29Q9UBQ0 182 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 DKKL1Q9UK85 242 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 PCTPQ9UKL6 214 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 UTS2RQ9UKP6 389 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 PCDHA9Q9Y5H5 950 aa12.13□□□□□ -0.47
CLSTN3-205ENST00000535452 LRRC14BA6NHZ5 514 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 CD8B2A6NJW9 211 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 OR7A17O14581 309 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 ULK1O75385 1050 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 REM1O75628 298 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 CTAG2O75638 210 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 ATP1B1P05026 303 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 SNRPAP09012 282 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 CTSSP25774 331 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 CASP3P42574 277 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 CRYZQ08257 329 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 ACSM2AQ08AH3 577 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 EFR3AQ14156 821 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 NNATQ16517 81 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 ACSM2BQ68CK6 577 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 COMMD6Q7Z4G1 85 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 LCA5Q86VQ0 697 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 SLC22A9Q8IVM8 553 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 OMA1Q96E52 524 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 LRRC1Q9BTT6 524 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 ZNF717Q9BY31 904 aaPredicted RBP12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 PRDM14Q9GZV8 571 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 CDC42EP4Q9H3Q1 356 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 CALHM2Q9HA72 323 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 CRIM1Q9NZV1 1036 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 NDRG3Q9UGV2 375 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 TRPS1Q9UHF7 1281 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 MRTO4Q9UKD2 239 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 SLC6A5Q9Y345 797 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 OR10H1Q9Y4A9 318 aa12.12□□□□□ -0.47
CLSTN3-205ENST00000535452 PHF3Q92576 2039 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms