RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 MRPL43Q8N983 215 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 ZNF383Q8NA42 475 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ZBTB44Q8NCP5 570 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 OR2AJ1Q8NGZ0 328 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 EXD1Q8NHP7 514 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 CCDC107Q8WV48 283 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 LPGAT1Q92604 370 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 CORO2AQ92828 525 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 TMEM143Q96AN5 459 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 PTERQ96BW5 349 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 EEF2KMTQ96G04 330 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 GMPPAQ96IJ6 420 aaPredicted RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 NSL1Q96IY1 281 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ART5Q96L15 291 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ATP6V1G3Q96LB4 118 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 GDAP1L1Q96MZ0 367 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 MS4A10Q96PG2 267 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ZNF317Q96PQ6 595 aaPredicted RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 GAL3ST4Q96RP7 486 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 NAP1L3Q99457 506 aaPredicted RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 HNRNPABQ99729 332 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 NAPGQ99747 312 aaPredicted RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 LAT2Q9GZY6 243 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ST6GALNAC4Q9H4F1 302 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 TUFT1Q9NNX1 390 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 SAMSN1Q9NSI8 373 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 ATAD3AQ9NVI7 634 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 ADAM22Q9P0K1 906 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 TMEM181Q9P2C4 612 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 IL17BQ9UHF5 180 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 CFAP45Q9UL16 551 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 PIN4Q9Y237 131 aaKnown RBP3.05□□□□□ -1.92
USP48-215ENST00000534705 COMMD3-BMI1R4GMX3 469 aa3.05□□□□□ -1.92
USP48-215ENST00000534705 A0A0J9YVX5 310 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 HYKKA2RU49 373 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 RGSL1A5PLK6 1076 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 ANKUB1A6NFN9 424 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 OOEPA6NGQ2 149 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 E9PMD0 336 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 M0QZ92 97 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 TRAFD1O14545 582 aaPredicted RBP3.04□□□□□ -1.92
USP48-215ENST00000534705 KLF11O14901 512 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 XRCC3O43542 346 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 TSC22D2O75157 780 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 SMIM24O75264 130 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 SERPINB7O75635 380 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 BCAS2O75934 225 aaPredicted RBP3.04□□□□□ -1.92
USP48-215ENST00000534705 TRIM16O95361 564 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 OR2T7P0C7T2 308 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 PABPC4LP0CB38 370 aaKnown RBP3.04□□□□□ -1.92
USP48-215ENST00000534705 TPBGLP0DKB5 382 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 NQO1P15559 274 aaKnown RBP3.04□□□□□ -1.92
USP48-215ENST00000534705 CEBPBP17676 345 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 CA4P22748 312 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 ADSSP30520 456 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 CASP14P31944 242 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 MC5RP33032 325 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 HSPA9P38646 679 aaKnown RBP3.04□□□□□ -1.92
USP48-215ENST00000534705 MAGEA11P43364 429 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 KHKP50053 298 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 PTENP60484 403 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 ASIC1P78348 528 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 MYL5Q02045 173 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 PPIDQ08752 370 aaKnown RBP3.04□□□□□ -1.92
USP48-215ENST00000534705 C17orf67Q0P5P2 114 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 LAMTOR4Q0VGL1 99 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 BNIP1Q12981 228 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 PARP6Q2NL67 630 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 EPC2Q52LR7 807 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 PDLIM3Q53GG5 364 aaPredicted RBP3.04□□□□□ -1.92
USP48-215ENST00000534705 IGSF11Q5DX21 431 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 TNFAIP8L3Q5GJ75 292 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 ADAMTSL4-AS1Q5T5F5 129 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 IL23RQ5VWK5 629 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 BSPRYQ5W0U4 402 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 SPECC1LQ69YQ0 1117 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 FAM173BQ6P4H8 233 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 FIGLAQ6QHK4 219 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 C1orf186Q6ZWK4 172 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 SLC24A5Q71RS6 500 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 SLC16A9Q7RTY1 509 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 SPATA19Q7Z5L4 167 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 CAMKMTQ7Z624 323 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 ZER1Q7Z7L7 766 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 ECHDC2Q86YB7 292 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 MAML2Q8IZL2 1156 aaPredicted RBP3.04□□□□□ -1.92
USP48-215ENST00000534705 SLC35F6Q8N357 371 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 ARFGAP2Q8N6H7 521 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 METTL13Q8N6R0 699 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 CCDC63Q8NA47 563 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 IPMKQ8NFU5 416 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 OR10S1Q8NGN2 331 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 FGFBP3Q8TAT2 258 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 MRGPRDQ8TDS7 321 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 IFT81Q8WYA0 676 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 ARNTL2Q8WYA1 636 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 DYRK2Q92630 601 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 P2RX5Q93086 422 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 TLCD1Q96CP7 247 aa3.04□□□□□ -1.92
USP48-215ENST00000534705 ARSGQ96EG1 525 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms