RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 MASP1P48740 699 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 PKNOX1P55347 436 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 ACSM2AQ08AH3 577 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 LCP2Q13094 533 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 PRICKLE4Q2TBC4 344 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 FAM219BQ5XKK7 198 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 ACSM2BQ68CK6 577 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 PACS2Q86VP3 889 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 PRR22Q8IZ63 422 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 ZNF295-AS1Q8N0V1 137 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 CCNYL1Q8N7R7 359 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 C17orf47Q8NEP4 570 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 ADCY4Q8NFM4 1077 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 SPPL2AQ8TCT8 520 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 SECISBP2Q96T21 854 aaKnown RBP14.18□□□□□ -0.14
CPSF1-211ENST00000533492 TXLNGYQ9BZA5 131 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 MCM8Q9UJA3 840 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 UTS2RQ9UKP6 389 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 LRRC3CA6NJW4 275 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 PCDH7O60245 1069 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 TRIM3O75382 744 aaPredicted RBP14.17□□□□□ -0.14
CPSF1-211ENST00000533492 ENO1P06733 434 aaKnown RBP14.17□□□□□ -0.14
CPSF1-211ENST00000533492 GLI4P10075 376 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 CHN1P15882 459 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 S1PR1P21453 382 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 GPX3P22352 226 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 ABCD3P28288 659 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 ZFP36L2P47974 494 aaKnown RBP14.17□□□□□ -0.14
CPSF1-211ENST00000533492 TRPC1P48995 793 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 BTKQ06187 659 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 EXOSC7Q15024 291 aaKnown RBP14.17□□□□□ -0.14
CPSF1-211ENST00000533492 TOMM20Q15388 145 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 NNATQ16517 81 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 SPIN4Q56A73 249 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 C1orf185Q5T7R7 199 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 BICRALQ6AI39 1079 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 FAM180BQ6P0A1 224 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 NEIL3Q8TAT5 605 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 CCDC126Q96EE4 140 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 L3HYPDHQ96EM0 354 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 LURAP1Q96LR2 239 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 RILPQ96NA2 401 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 ANGPTL4Q9BY76 406 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 NXF5Q9H1B4 397 aaKnown RBP14.17□□□□□ -0.14
CPSF1-211ENST00000533492 SLC6A15Q9H2J7 730 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 MAT2BQ9NZL9 334 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 SPRR3Q9UBC9 169 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 PRODH2Q9UF12 536 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 DLGAP4Q9Y2H0 992 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 TIMM22Q9Y584 194 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 FREM3P0C091 2139 aa14.17□□□□□ -0.14
CPSF1-211ENST00000533492 INTS1Q8N201 2190 aaKnown RBP14.16□□□□□ -0.14
CPSF1-211ENST00000533492 C15orf38-AP3S2A0A0A6YYH1 394 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 A0A1W2PPM1 405 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 FOXO6A8MYZ6 492 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 FAM47E-STBD1D6RA91 191 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 CDH16O75309 829 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 GLRA3O75311 464 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 TOXO94900 526 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 MYL2P10916 166 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 DRD2P14416 443 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 NAGAP17050 411 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 ENDOUP21128 410 aaKnown RBP14.16□□□□□ -0.14
CPSF1-211ENST00000533492 ELAVL4P26378 380 aaKnown RBP14.16□□□□□ -0.14
CPSF1-211ENST00000533492 CASP3P42574 277 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 DCAF7P61962 342 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 HMGCS1Q01581 520 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 MGAT2Q10469 447 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 HEPACAMQ14CZ8 416 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 TRMT12Q53H54 448 aaKnown RBP14.16□□□□□ -0.14
CPSF1-211ENST00000533492 RTL6Q6ICC9 239 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 NUP54Q7Z3B4 507 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 GSPT2Q8IYD1 628 aaKnown RBP14.16□□□□□ -0.14
CPSF1-211ENST00000533492 CCDC116Q8IYX3 515 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 SAMD14Q8IZD0 417 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-211ENST00000533492 OR52R1Q8NGF1 315 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 UBLCP1Q8WVY7 318 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-211ENST00000533492 HSPBAP1Q96EW2 488 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 C14orf79Q96F83 325 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 CNRIP1Q96F85 164 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-211ENST00000533492 LCORQ96JN0 433 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-211ENST00000533492 ITPAQ9BY32 194 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 ACPTQ9BZG2 426 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 EPB41L4BQ9H329 900 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 METTL7AQ9H8H3 244 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 MID1IP1Q9NPA3 183 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 GIMAP4Q9NUV9 329 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 HEY2Q9UBP5 337 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 ZNF639Q9UID6 485 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 DTX4Q9Y2E6 619 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 FAM215AQ9Y5M1 114 aa14.16□□□□□ -0.14
CPSF1-211ENST00000533492 NCKAP5O14513 1909 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 CRCPO75575 148 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 PPM1BO75688 479 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 BCAS2O75934 225 aaPredicted RBP14.15□□□□□ -0.14
CPSF1-211ENST00000533492 ABCB1P08183 1280 aaPredicted RBP14.15□□□□□ -0.14
CPSF1-211ENST00000533492 IL3P08700 152 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 CCT5P48643 541 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 HTR6P50406 440 aa14.15□□□□□ -0.14
CPSF1-211ENST00000533492 NAA20P61599 178 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms