RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PROK2Q9HC23 129 aa27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 RRAGDQ9NQL2 400 aaPredicted RBP27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 CNOT11Q9UKZ1 510 aaKnown RBP27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 PCNX1Q96RV3 2341 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 ZNF407Q9C0G0 2248 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 PRSS44E7EML9 344 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 E9PLN8 166 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 TP53I11O14683 189 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 TMED10P49755 219 aaKnown RBP27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 ZNF763Q0D2J5 394 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 RPS6KA2Q15349 733 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 TRMT12Q53H54 448 aaKnown RBP27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 XKRXQ6PP77 449 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 C3P1Q6ZMU1 363 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 CCDC116Q8IYX3 515 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 FAM111AQ96PZ2 611 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 VKORC1Q9BQB6 163 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 TRMOQ9BU70 441 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 EHD3Q9NZN3 535 aa27.86■■■□□ 2.05
SSSCA1-207ENST00000533115 ADAM10O14672 748 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 RSL1D1O76021 490 aaKnown RBP27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 CBX7O95931 251 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 IGHG3P01860 377 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 PCSK2P16519 638 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 AGAP20933 346 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 FBXW4P57775 412 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 CLEC6AQ6EIG7 209 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 SIMC1Q8NDZ2 872 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 OR52R1Q8NGF1 315 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 FAM76AQ8TAV0 307 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 ZNF675Q8TD23 568 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 PHF10Q8WUB8 498 aaKnown RBP27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 DMRTA2Q96SC8 542 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 NXF5Q9H1B4 397 aaKnown RBP27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 ZFP64Q9NPA5 681 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 SLC35C2Q9NQQ7 365 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 GIMAP4Q9NUV9 329 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 BOKQ9UMX3 212 aaPredicted RBP27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 ENTPD4Q9Y227 616 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 KLF2Q9Y5W3 355 aaPredicted RBP27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 LIPGQ9Y5X9 500 aa27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 NCOA6Q14686 2063 aaPredicted RBP27.85■■■□□ 2.05
SSSCA1-207ENST00000533115 LRATO95237 230 aa27.84■■■□□ 2.05
SSSCA1-207ENST00000533115 MRPS35P82673 323 aaKnown RBP27.84■■■□□ 2.05
SSSCA1-207ENST00000533115 ERCC6LQ2NKX8 1250 aa27.84■■■□□ 2.05
SSSCA1-207ENST00000533115 ZNF628Q5EBL2 1059 aa27.84■■■□□ 2.05
SSSCA1-207ENST00000533115 CRYBG3Q68DQ2 2970 aa27.84■■■□□ 2.05
SSSCA1-207ENST00000533115 NCCRP1Q6ZVX7 275 aaPredicted RBP27.84■■■□□ 2.05
SSSCA1-207ENST00000533115 DIO2Q92813 273 aa27.84■■■□□ 2.05
SSSCA1-207ENST00000533115 ITPAQ9BY32 194 aa27.84■■■□□ 2.05
SSSCA1-207ENST00000533115 SLC17A7Q9P2U7 560 aa27.84■■■□□ 2.05
SSSCA1-207ENST00000533115 PRODH2Q9UF12 536 aa27.84■■■□□ 2.05
SSSCA1-207ENST00000533115 POLR3HQ9Y535 204 aaPredicted RBP27.84■■■□□ 2.05
SSSCA1-207ENST00000533115 ATP6AP2A0A1C7CYW4 349 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 ANKRD33BA6NCL7 494 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 AZIN1O14977 448 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 SPAG7O75391 227 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 ATP6AP2O75787 350 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 CELA3AP09093 270 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 DDCP20711 480 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 ABCD3P28288 659 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 ALDH3A1P30838 453 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 C2orf80Q0P641 193 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 SLC10A1Q14973 349 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 CEBPEQ15744 281 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 TBCELQ5QJ74 424 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 TRILQ7L0X0 811 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 PRR22Q8IZ63 422 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 SLC34A3Q8N130 599 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 MREGQ8N565 214 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 CDC26Q8NHZ8 85 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 SPPL2AQ8TCT8 520 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 SECISBP2Q96T21 854 aaKnown RBP27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 DOHHQ9BU89 302 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 TMEM109Q9BVC6 243 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 PARD6BQ9BYG5 372 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 CCL27Q9Y4X3 112 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 HRH3Q9Y5N1 445 aa27.83■■■□□ 2.05
SSSCA1-207ENST00000533115 CELSR2Q9HCU4 2923 aa27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 DNAJC13O75165 2243 aa27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 A0A1B0GVC2 190 aa27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 BCAS2O75934 225 aaPredicted RBP27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 EMDP50402 254 aa27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 NNATQ16517 81 aa27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 SP5Q6BEB4 398 aaPredicted RBP27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 FAM71E1Q6IPT2 247 aa27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 OR9A2Q8NGT5 310 aa27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 PUM2Q8TB72 1066 aaKnown RBP eCLIP27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 TCP10LQ8TDR4 215 aa27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 ERP27Q96DN0 273 aa27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 HSPBAP1Q96EW2 488 aa27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 METTL2AQ96IZ6 378 aaKnown RBP27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 LCORQ96JN0 433 aaPredicted RBP27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 SMC6Q96SB8 1091 aa27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 ZNF703Q9H7S9 590 aaPredicted RBP27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 WBP11Q9Y2W2 641 aaKnown RBP27.82■■■□□ 2.04
SSSCA1-207ENST00000533115 LRRC3CA6NJW4 275 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 NPIPA2E9PIF3 369 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 NPIPA3F8WFD2 350 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 SLC28A1O00337 649 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms