RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 CERS1P27544 350 aa14.54□□□□□ -0.08
PCDHA3-202ENST00000532566 DPP6P42658 865 aa14.54□□□□□ -0.08
PCDHA3-202ENST00000532566 CXCR4P61073 352 aa14.54□□□□□ -0.08
PCDHA3-202ENST00000532566 ARMCX6Q7L4S7 300 aa14.54□□□□□ -0.08
PCDHA3-202ENST00000532566 METTL27Q8N6F8 245 aaPredicted RBP14.54□□□□□ -0.08
PCDHA3-202ENST00000532566 TEX37Q96LM6 180 aa14.54□□□□□ -0.08
PCDHA3-202ENST00000532566 ZFYVE21Q9BQ24 234 aa14.54□□□□□ -0.08
PCDHA3-202ENST00000532566 PRRG4Q9BZD6 226 aa14.54□□□□□ -0.08
PCDHA3-202ENST00000532566 PDE7BQ9NP56 450 aa14.54□□□□□ -0.08
PCDHA3-202ENST00000532566 ERVK-11Q9UQG0 969 aa14.54□□□□□ -0.08
PCDHA3-202ENST00000532566 HMGN2P05204 90 aaKnown RBP14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 MRPL3P09001 348 aaKnown RBP14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 ITGAMP11215 1152 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 SHC2P98077 582 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 NNATQ16517 81 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 SLITRK4Q8IW52 837 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 ACOT4Q8N9L9 421 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 ZDHHC12Q96GR4 267 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 C8orf33Q9H7E9 229 aaPredicted RBP14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 SMURF1Q9HCE7 757 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 CENPMQ9NSP4 180 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 FOXE1O00358 373 aaPredicted RBP14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 KLHL18O94889 574 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 SEMA4FO95754 770 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 PIM1P11309 404 aaPredicted RBP14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 MMP12P39900 470 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 BMXP51813 675 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 C22orf42Q6IC83 251 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 C12orf40Q86WS4 652 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 VRK3Q8IV63 474 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 PELOQ9BRX2 385 aaKnown RBP14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 HCN3Q9P1Z3 774 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 F5P12259 2224 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 ZNF831Q5JPB2 1677 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 PPM1BO75688 479 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 STARP49675 285 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 TAP2Q03519 686 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 ZNF181Q2M3W8 571 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 OR8H1Q8NGG4 311 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 JSRP1Q96MG2 331 aaPredicted RBP14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 NKX2-4Q9H2Z4 354 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 IL37Q9NZH6 218 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 GRHPRQ9UBQ7 328 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 KIAA1217Q5T5P2 1943 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 A0A1W2PQ72 361 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 SLC35F4A4IF30 521 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 SLC22A31A6NKX4 558 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 CFIP05156 583 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 LHCGRP22888 699 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 LBX1P52954 281 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 LRIT3Q3SXY7 679 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 GPALPP1Q8IXQ4 340 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 METTL4Q8N3J2 472 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 SLC15A4Q8N697 577 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 OR52E1Q8NGJ3 308 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 OR2AJ1Q8NGZ0 328 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 C15orf40Q8WUR7 153 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 THEM6Q8WUY1 208 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 WACQ9BTA9 647 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 STUB1Q9UNE7 303 aa14.53□□□□□ -0.08
PCDHA3-202ENST00000532566 FLRT2O43155 660 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 MC3RP41968 323 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 ACTC1P68032 377 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 ACTA1P68133 377 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 ADAM8P78325 824 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 TCEAL5Q5H9L2 206 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 ZNF691Q5VV52 312 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 SLCO4C1Q6ZQN7 724 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 GRPEL2Q8TAA5 225 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 FRMD6Q96NE9 622 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 MS4A4EQ96PG1 132 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 ENPP5Q9UJA9 477 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 PCDHGA10Q9Y5H3 936 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 GMEB1Q9Y692 573 aa14.52□□□□□ -0.08
PCDHA3-202ENST00000532566 A0A1B0GVT2 93 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 GPR143P51810 404 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 PPP5CP53041 499 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 NRMQ8IXM6 262 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 GATSQ8NAP1 163 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 FAM46AQ96IP4 442 aaKnown RBP14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 HSPA12BQ96MM6 686 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 POLDIP3Q9BY77 421 aaKnown RBP14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 UPB1Q9UBR1 384 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 TARM1B6A8C7 271 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 NUDT7P0C024 238 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 SBK3P0C264 359 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 RNF144AP50876 292 aaPredicted RBP14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 TRA2BP62995 288 aaKnown RBP14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 HHEXQ03014 270 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 PRDX1Q06830 199 aaKnown RBP14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 IRF4Q15306 451 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 TRIM73Q86UV7 250 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 IQCF1Q8N6M8 205 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 SMPDL3BQ92485 455 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 NKD1Q969G9 470 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 TTTY10Q9BZA0 68 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 POLE4Q9NR33 117 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 SHROOM3Q8TF72 1996 aa14.52□□□□□ -0.09
PCDHA3-202ENST00000532566 TRAPPC13A5PLN9 417 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms