RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 UBE2ZQ9H832 354 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 LRTM1Q9HBL6 345 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 RAD18Q9NS91 495 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 MYEF2Q9P2K5 600 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 HECAQ9UBI9 543 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 CORO2BQ9UQ03 480 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 CHD7Q9P2D1 2997 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 DOCK6Q96HP0 2047 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 A0A0G2JMP0 313 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 OR6C74A6NCV1 312 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF705EA8MWA4 302 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ARHGAP33O14559 1287 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ENTPD6O75354 484 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ATG12O94817 140 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 LRATO95237 230 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 NFATC1O95644 943 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 PTHP01270 115 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 IGHA2P01877 340 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 CD63P08962 238 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 RD3LP0DJH9 198 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 IL9P15248 144 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 HMGCLP35914 325 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 HSPA7P48741 367 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 DGKEP52429 567 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC10A7Q0GE19 358 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 VMACQ2NL98 169 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 UNC50Q53HI1 259 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 METTL11BQ5VVY1 283 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 CD276Q5ZPR3 534 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TCEAL6Q6IPX3 200 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TMPRSS9Q7Z410 1059 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ZFAND4Q86XD8 727 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ZFP82Q8N141 532 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 DNAJC22Q8N4W6 341 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 MS4A15Q8N5U1 240 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 DNASE1L2Q92874 299 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 HSH2DQ96JZ2 352 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 EGLN2Q96KS0 407 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 MYADMQ96S97 322 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 P2RY13Q9BPV8 354 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 GORASP2Q9H8Y8 452 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 DNAJC27Q9NZQ0 273 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 PSORS1C1Q9UIG5 152 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 USP22Q9UPT9 525 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 IRAK3Q9Y616 596 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 PIAS3Q9Y6X2 628 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 PLXNA1Q9UIW2 1896 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ANTXRLA6NF34 631 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 TSPAN12O95859 305 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 ADH5P11766 374 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 PFKLP17858 780 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 DRD5P21918 477 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 PCMT1P22061 227 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 HSD17B2P37059 387 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 NR0B1P51843 470 aaKnown RBP6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 ARHGDIBP52566 201 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 SMSP52788 366 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 EEF1A1P68104 462 aaKnown RBP6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 HTRA4P83105 476 aaPredicted RBP6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 EEF1A2Q05639 463 aaKnown RBP6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 COTL1Q14019 142 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 DPY19L1Q2PZI1 675 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 IFI44LQ53G44 452 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 EEF1A1P5Q5VTE0 462 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 ATG9BQ674R7 924 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 NCBP2-AS2Q69YL0 99 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 GPR139Q6DWJ6 353 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 METAP1DQ6UB28 335 aaPredicted RBP6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 TPRG1Q6ZUI0 275 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC16A13Q7RTY0 426 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 FAM122BQ7Z309 247 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 LDB1Q86U70 411 aaPredicted RBP6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 NPAS3Q8IXF0 933 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 ADGRF3Q8IZF5 1079 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 APCDD1Q8J025 514 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 LIX1Q8N485 282 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 DPP10Q8N608 796 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 CELF5Q8N6W0 485 aaKnown RBP6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 SAMD12Q8N8I0 201 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 C11orf65Q8NCR3 313 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 BEST4Q8NFU0 473 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 OR14C36Q8NHC7 312 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 NEIL3Q8TAT5 605 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 SCARB1Q8WTV0 552 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 FGF14Q92915 247 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 TEFMQ96QE5 360 aaKnown RBP6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 SMIM14Q96QK8 99 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 NELL2Q99435 816 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 NPY6RQ99463 290 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 NPAS1Q99742 590 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 ADGRE3Q9BY15 652 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 TGIF2Q9GZN2 237 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF385DQ9H6B1 395 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 MRM3Q9HC36 420 aaKnown RBP6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 OR6C2Q9NZP2 312 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 FBXL2Q9UKC9 423 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 CACNG2Q9Y698 323 aa6.46□□□□□ -1.37
TGFBR3-209ENST00000532540 SYNDIG1LA6NDD5 238 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 D6RAR5 112 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 PRKYO43930 277 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms