RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 JAK1P23458 1154 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 ITGA3P26006 1051 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 HNRNPH1P31943 449 aaKnown RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZNF41P51814 821 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 PLA2G16P53816 162 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 RPS3AP61247 264 aaKnown RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 PHEXP78562 749 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 TEKQ02763 1124 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 AIMP2Q13155 320 aaKnown RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 RAPSNQ13702 412 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 DDX39BQ13838 428 aaKnown RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 E2F2Q14209 437 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 CPSF6Q16630 551 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 ADPRMQ3LIE5 342 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 TMEM35AQ53FP2 167 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 FAM69AQ5T7M9 428 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 LIPJQ5W064 366 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 TCTN3Q6NUS6 607 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 TRIM40Q6P9F5 258 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 LINC00114Q6XXX2 140 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 ASB18Q6ZVZ8 466 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 USP51Q70EK9 711 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 IKBIPQ70UQ0 350 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 H1FNTQ75WM6 255 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 NDUFAF7Q7L592 441 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 TDRPQ86YL5 185 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 LAS2Q8IYD9 372 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 SAMD14Q8IZD0 417 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZNF619Q8N2I2 560 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 GALNT16Q8N428 558 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 TMEM151AQ8N4L1 468 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 SRFBP1Q8NEF9 429 aaKnown RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 FDCSPQ8NFU4 85 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 OR2L5Q8NG80 312 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 OR7G3Q8NG95 312 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 OR1N1Q8NGS0 311 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 MOSPD2Q8NHP6 518 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 PPP4R1Q8TF05 950 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 CAVIN3Q969G5 261 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 RAB24Q969Q5 203 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 C8orf44Q96CB5 159 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 MS4A6EQ96DS6 147 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 SMIM10Q96HG1 83 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 FAM46AQ96IP4 442 aaKnown RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 OR1F2PQ96R84 312 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 F2RL3Q96RI0 385 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 MESP1Q9BRJ9 268 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 CENPKQ9BS16 269 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 FUZQ9BT04 418 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 NUDT9Q9BW91 350 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 NPLQ9BXD5 320 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 VN1R1Q9GZP7 353 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 COPS7BQ9H9Q2 264 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZNF160Q9HCG1 818 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 SEMA4BQ9NPR2 832 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 PPP1R14DQ9NXH3 145 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 GPR83Q9NYM4 423 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 TMEM216Q9P0N5 145 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 C19orf25Q9UFG5 118 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 MID2Q9UJV3 735 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 PCTPQ9UKL6 214 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 CAMK2AQ9UQM7 478 aa5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 HEMK1Q9Y5R4 338 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P42-201ENST00000532126 CFAP47Q6ZTR5 3102 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZFYVE26Q68DK2 2539 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 LOC102723996A0A087X1L8 192 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 IGHV1-45A0A0A0MS14 117 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 OR2W5A6NFC9 320 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 MAGEB17A8MXT2 336 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 C4orf51C9J302 202 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 K7EM74 188 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 F2RL2O00254 374 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 SAP18O00422 153 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 COPEO14579 308 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 B4GALT2O60909 372 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 GLRA3O75311 464 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 SH3BGRLO75368 114 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 SUPT7LO94864 414 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 TBX6O95947 436 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 OTCP00480 354 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 TGFB1P01137 390 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 SERPINA7P05543 415 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 FHP07954 510 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 RPS17P08708 135 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 SBK3P0C264 359 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 MYL2P10916 166 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 UBL4AP11441 157 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 COX6A1P12074 109 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 RNH1P13489 461 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 BTF3P20290 206 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 NR1D1P20393 614 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ACVR2AP27037 513 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 APEX1P27695 318 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ADSLP30566 484 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 CRHR1P34998 444 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 SLC6A9P48067 706 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 CCNG1P51959 295 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 RAP1GDS1P52306 607 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 EFNA3P52797 238 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 MTTPP55157 894 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms