RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 SLC22A10Q63ZE4 541 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 STOX1Q6ZVD7 989 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 PRSS48Q7RTY5 328 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 MCOLN2Q8IZK6 566 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 SYCP3Q8IZU3 236 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 CEND1Q8N111 149 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 RNF175Q8N4F7 328 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 C14orf178Q8N769 122 aaPredicted RBP2.13□□□□□ -2.07
ATM-217ENST00000531957 OR13F1Q8NGS4 319 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 CCDC26Q8TAB7 109 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 GLYATL1Q969I3 302 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 FAM46BQ96A09 425 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 FAM122AQ96E09 287 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 CFAP36Q96G28 342 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 RPGRIP1Q96KN7 1286 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 DDX50Q9BQ39 737 aaKnown RBP2.13□□□□□ -2.07
ATM-217ENST00000531957 NTMT1Q9BV86 223 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 ELOVL4Q9GZR5 314 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 ABCB8Q9NUT2 735 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 TUBGCP4Q9UGJ1 667 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 EMCNQ9ULC0 261 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 DIMT1Q9UNQ2 313 aaKnown RBP2.13□□□□□ -2.07
ATM-217ENST00000531957 KIF7Q2M1P5 1343 aa2.13□□□□□ -2.07
ATM-217ENST00000531957 EI24O14681 340 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 SH2D1BO14796 132 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 GHRP10912 638 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 FERP16591 822 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 ZNF17P17021 662 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 PSMB1P20618 241 aaKnown RBP2.12□□□□□ -2.07
ATM-217ENST00000531957 PTPN4P29074 926 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 SNU13P55769 128 aaKnown RBP2.12□□□□□ -2.07
ATM-217ENST00000531957 HAGHQ16775 308 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 SHROOM1Q2M3G4 852 aaPredicted RBP2.12□□□□□ -2.07
ATM-217ENST00000531957 KBTBD12Q3ZCT8 623 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 ZNF789Q5FWF6 425 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 RHBDD2Q6NTF9 364 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 CDC42EP5Q6NZY7 148 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 GPR142Q7Z601 462 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 FRAT1Q92837 279 aaPredicted RBP2.12□□□□□ -2.07
ATM-217ENST00000531957 C16orf74Q96GX8 76 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 IMMP1LQ96LU5 166 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 C9orf85Q96MD7 179 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 GPR174Q9BXC1 333 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 HES7Q9BYE0 225 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 NMUR2Q9GZQ4 415 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 GANQ9H2C0 597 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 DCLRE1BQ9H816 532 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 ZWILCHQ9H900 591 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 ZCCHC17Q9NP64 241 aaKnown RBP2.12□□□□□ -2.07
ATM-217ENST00000531957 MYOZ2Q9NPC6 264 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 CENPMQ9NSP4 180 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 DDX28Q9NUL7 540 aaKnown RBP2.12□□□□□ -2.07
ATM-217ENST00000531957 ERVK-18Q9QC07 812 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 SLC2A6Q9UGQ3 507 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 RNF115Q9Y4L5 304 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 FLVCR1Q9Y5Y0 555 aa2.12□□□□□ -2.07
ATM-217ENST00000531957 CFAP65Q6ZU64 1925 aaKnown RBP2.12□□□□□ -2.07
ATM-217ENST00000531957 IGLV8-61A0A075B6I0 122 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 TRIM49D1C9J1S8 452 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 C11orf98E9PRG8 122 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 CACNB4O00305 520 aaPredicted RBP2.11□□□□□ -2.07
ATM-217ENST00000531957 ATP6V1G1O75348 118 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 TXNDC12O95881 172 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 SFTPBP07988 381 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 GSTA1P08263 222 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 ALPIP09923 528 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 ZNF853P0CG23 659 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 TRIM23P36406 574 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 SERPINH1P50454 418 aaKnown RBP2.11□□□□□ -2.07
ATM-217ENST00000531957 HNRNPA3P51991 378 aaKnown RBP2.11□□□□□ -2.07
ATM-217ENST00000531957 VCPP55072 806 aaKnown RBP2.11□□□□□ -2.07
ATM-217ENST00000531957 YWHAHQ04917 246 aaPredicted RBP2.11□□□□□ -2.07
ATM-217ENST00000531957 STXBP2Q15833 593 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 KYAT1Q16773 422 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 MEP1BQ16820 701 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 KCTD11Q693B1 232 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 ZCCHC12Q6PEW1 402 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 ADAMTSL5Q6ZMM2 481 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 PIWIL3Q7Z3Z3 882 aaKnown RBP2.11□□□□□ -2.07
ATM-217ENST00000531957 PYROXD2Q8N2H3 581 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 GPR137CQ8N3F9 429 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 OR52J3Q8NH60 311 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 MARC2Q969Z3 335 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 ELSPBP1Q96BH3 223 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 CAPNS2Q96L46 248 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 NRN1Q9NPD7 142 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 VPS54Q9P1Q0 977 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 APOBEC3BQ9UH17 382 aaKnown RBP2.11□□□□□ -2.07
ATM-217ENST00000531957 LEF1Q9UJU2 399 aaPredicted RBP2.11□□□□□ -2.07
ATM-217ENST00000531957 FGD5Q6ZNL6 1462 aa2.11□□□□□ -2.07
ATM-217ENST00000531957 A0A0A6YYC8 382 aaPredicted RBP2.1□□□□□ -2.07
ATM-217ENST00000531957 A0A0A6YYD4 124 aa2.1□□□□□ -2.07
ATM-217ENST00000531957 A0A0J9YVX5 310 aa2.1□□□□□ -2.07
ATM-217ENST00000531957 A4D1N5 150 aa2.1□□□□□ -2.07
ATM-217ENST00000531957 FAM231BA6NCW3 169 aa2.1□□□□□ -2.07
ATM-217ENST00000531957 MFSD2BA6NFX1 497 aa2.1□□□□□ -2.07
ATM-217ENST00000531957 I3L1I5 382 aaPredicted RBP2.1□□□□□ -2.07
ATM-217ENST00000531957 ZNF861PO60384 105 aa2.1□□□□□ -2.07
ATM-217ENST00000531957 RANBP6O60518 1105 aaKnown RBP2.1□□□□□ -2.07
ATM-217ENST00000531957 SERF1AO75920 110 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms