RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 RHAGQ02094 409 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 SSX1Q16384 188 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 FAM71E1Q6IPT2 247 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 TCTN3Q6NUS6 607 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 UNC5DQ6UXZ4 953 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 VWA5B2Q8N398 1253 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 KLHL36Q8N4N3 616 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 IL17RDQ8NFM7 739 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 METTL2AQ96IZ6 378 aaKnown RBP10.73□□□□□ -0.69
NXF1-211ENST00000531709 DPH7Q9BTV6 452 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 TMEM38AQ9H6F2 299 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 MVB12BQ9H7P6 319 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 HHATLQ9HCP6 504 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 EXTL2Q9UBQ6 330 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 NOX1Q9Y5S8 564 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 TET1Q8NFU7 2136 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 F5P12259 2224 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 MYOFQ9NZM1 2061 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 SCN4AP35499 1836 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 LOC102723532A0A0G2JNH3 316 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 PGRMC2O15173 223 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 TPD52L2O43399 206 aaKnown RBP10.73□□□□□ -0.69
NXF1-211ENST00000531709 CHST10O43529 356 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 MRPL3P09001 348 aaKnown RBP10.73□□□□□ -0.69
NXF1-211ENST00000531709 CTNNB1P35222 781 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 Q6ZNB5 142 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 PHC2Q8IXK0 858 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 ANKK1Q8NFD2 765 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 CDCA4Q9BXL8 241 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 ADAP2Q9NPF8 381 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 GPATCH2Q9NW75 528 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 DAPL1A0PJW8 107 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 INMT-MINDY4F8WBC2 141 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 GNB5O14775 395 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 DHFRP00374 187 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 RHOP08100 348 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 ILKQ13418 452 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 TATDN3Q17R31 274 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 VN1R5Q7Z5H4 357 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 UBQLNLQ8IYU4 475 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 ING4Q9UNL4 249 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 ZSWIM8A7E2V4 1837 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 SLC5A10A0PJK1 596 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 IRGMA1A4Y4 181 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 ZNF670-ZNF695F2Z2N8 137 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 HMGN2P05204 90 aaKnown RBP10.73□□□□□ -0.69
NXF1-211ENST00000531709 GSTM3P21266 225 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 CBLP22681 906 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 SLC7A9P82251 487 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 ZNF362Q5T0B9 420 aaPredicted RBP10.73□□□□□ -0.69
NXF1-211ENST00000531709 HENMT1Q5T8I9 393 aaKnown RBP10.73□□□□□ -0.69
NXF1-211ENST00000531709 ACSM5Q6NUN0 579 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 XKRXQ6PP77 449 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 GDPGP1Q6ZNW5 385 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 FBLIM1Q8WUP2 373 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 SAP130Q9H0E3 1048 aa10.73□□□□□ -0.69
NXF1-211ENST00000531709 C1QTNF3-AMACRE9PGA6 284 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 SMLR1H3BR10 107 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 PAK4O96013 591 aaPredicted RBP10.72□□□□□ -0.69
NXF1-211ENST00000531709 GNSP15586 552 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 ETV5P41161 510 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 ETV1P50549 477 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 ID2Q02363 134 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 MLLT11Q13015 90 aaPredicted RBP10.72□□□□□ -0.69
NXF1-211ENST00000531709 ZNF750Q32MQ0 723 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 LRRTM4Q86VH4 590 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 GLCCI1Q86VQ1 547 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 PGBD3Q8N328 593 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 C10orf53Q8N6V4 93 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 SAMD12Q8N8I0 201 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 KIAA1958Q8N8K9 716 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 OR6T1Q8NGN1 323 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 MRPS30Q9NP92 439 aaKnown RBP10.72□□□□□ -0.69
NXF1-211ENST00000531709 ANKRD34BA5PLL1 514 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 PLPP1O14494 284 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 GCM2O75603 506 aaPredicted RBP10.72□□□□□ -0.69
NXF1-211ENST00000531709 OR2B3O76000 313 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 OR5F1O95221 314 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 ADH1CP00326 375 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 CSNK2A2P19784 350 aaPredicted RBP10.72□□□□□ -0.69
NXF1-211ENST00000531709 MPIP34949 423 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 METAP1P53582 386 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 RAB14P61106 215 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 BNC1Q01954 994 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 PCDH1Q08174 1060 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 ST3GAL3Q11203 375 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 PUM1Q14671 1186 aaKnown RBP eCLIP10.72□□□□□ -0.69
NXF1-211ENST00000531709 PGBD2Q6P3X8 592 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 CCDC190Q86UF4 302 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 PLPP6Q8IY26 295 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 YAF2Q8IY57 180 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 PEX5LQ8IYB4 626 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 OR8H3Q8N146 312 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 SETD6Q8TBK2 473 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 PIGKQ92643 395 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 MCHR1Q99705 422 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 TM7SF3Q9NS93 570 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 OR1A2Q9Y585 309 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 PCDHGB2Q9Y5G2 931 aa10.72□□□□□ -0.69
NXF1-211ENST00000531709 HMX3A6NHT5 357 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms